RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 BCO1Q9HAY6 547 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 USP29Q9HBJ7 922 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 POPDC2Q9HBU9 364 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 TUBG2Q9NRH3 451 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.4□□□□□ -1.87
SMG6-208ENST00000570874 C20orf96Q9NUD7 363 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 HIF1ANQ9NWT6 349 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 DDIT4Q9NX09 232 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 GFOD1Q9NXC2 390 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 KCNK4Q9NYG8 393 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 GDE1Q9NZC3 331 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 HACD3Q9P035 362 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CHRNA9Q9UGM1 479 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 WARS2Q9UGM6 360 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 UBQLN2Q9UHD9 624 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CRLS1Q9UJA2 301 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 NEU3Q9UQ49 428 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 MGAT4BQ9UQ53 548 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 KCNK6Q9Y257 313 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 DRG1Q9Y295 367 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 WBP11Q9Y2W2 641 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 SF3B6Q9Y3B4 125 aaKnown RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 ST14Q9Y5Y6 855 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 B3GALT1Q9Y5Z6 326 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 CDY1Q9Y6F8 540 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 PLXND1Q9Y4D7 1925 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 MUC22E2RYF6 1773 aaPredicted RBP3.4□□□□□ -1.87
SMG6-208ENST00000570874 CLUHO75153 1309 aa3.4□□□□□ -1.87
SMG6-208ENST00000570874 TDRD6O60522 2096 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 TRBV23OR9-2A0A075B6M9 112 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 A0A1B0GUH1 482 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 A0A1W2PQM1 296 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 MEX3AA1L020 520 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 NPIPB13A6NJU9 1138 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 CD8B2A6NJW9 211 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 PCP4L1A6NKN8 68 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SLC38A8A6NNN8 435 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 NOTOA8MTQ0 251 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 WASH4PA8MWX3 477 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 C22orf46C9J442 243 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 NPIPB4C9JG80 1138 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 J3QW42 95 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 TLR4O00206 839 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 EEF2KO00418 725 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 SCDO00767 359 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ANKRD28O15084 1053 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ST8SIA3O43173 380 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SEC14L5O43304 696 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 RNF13O43567 381 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 TLX3O43711 291 aaPredicted RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 LANCL1O43813 399 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 MITFO75030 526 aaPredicted RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 GPX5O75715 221 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 LRIG2O94898 1065 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 GJB5O95377 273 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 LY86O95711 162 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 CXCL14O95715 111 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ABHD16AO95870 558 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 MOCS2O96007 188 aaPredicted RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 CRYABP02511 175 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 SRPRAP08240 638 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 HMBSP08397 361 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 FURINP09958 794 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SBK2P0C263 348 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 LINC00271P0C7V0 271 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SPATA31D3P0C874 917 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 HAPLN1P10915 354 aaPredicted RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 PEPDP12955 493 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 IFNGR1P15260 489 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 NQO2P16083 231 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 TGM2P21980 687 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 GLDCP23378 1020 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 MST1P26927 711 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ACVR2AP27037 513 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 GCAP28676 217 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SSTR1P30872 391 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 DCTDP32321 178 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 CD80P33681 288 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 GSTM5P46439 218 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 RPS5P46782 204 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 CSNK1EP49674 416 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 CXCR3P49682 368 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ACADVLP49748 655 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 GNG10P50151 68 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 RASSF2P50749 326 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 PLK1P53350 603 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 SLC18A1P54219 525 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 TIRAPP58753 221 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 TPI1P60174 286 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 C1QTNF8P60827 252 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 WDR5P61964 334 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 RAB11AP62491 216 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 REEP5Q00765 189 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 PLAURQ03405 335 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 ZNF33AQ06730 810 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 KLC1Q07866 573 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 EFEMP1Q12805 493 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 TAF10Q12962 218 aa3.39□□□□□ -1.87
SMG6-208ENST00000570874 PPP1R8Q12972 351 aaKnown RBP3.39□□□□□ -1.87
SMG6-208ENST00000570874 PDIA2Q13087 525 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms