RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 MAPKAP1Q9BPZ7 522 aa12.66□□□□□ -0.38
CNOT1-215ENST00000569020 CD244Q9BZW8 370 aa12.66□□□□□ -0.38
CNOT1-215ENST00000569020 PHACTR1Q9C0D0 580 aa12.66□□□□□ -0.38
CNOT1-215ENST00000569020 IL1RL2Q9HB29 575 aa12.66□□□□□ -0.38
CNOT1-215ENST00000569020 SAYSD1Q9NPB0 183 aa12.66□□□□□ -0.38
CNOT1-215ENST00000569020 SACM1LQ9NTJ5 587 aa12.66□□□□□ -0.38
CNOT1-215ENST00000569020 RNF14Q9UBS8 474 aa12.66□□□□□ -0.38
CNOT1-215ENST00000569020 PTBP2Q9UKA9 531 aaKnown RBP12.66□□□□□ -0.38
CNOT1-215ENST00000569020 DNAJC13O75165 2243 aa12.66□□□□□ -0.38
CNOT1-215ENST00000569020 ARHGAP21Q5T5U3 1957 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 FIGNL2A6NMB9 653 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 CXorf49A8MYA2 514 aaPredicted RBP12.65□□□□□ -0.38
CNOT1-215ENST00000569020 G3V3Y1 287 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 BCKDKO14874 412 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 DYRK3O43781 588 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 P04436 131 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 PCNAP12004 261 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 CPN2P22792 545 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 ATP5A1P25705 553 aaKnown RBP12.65□□□□□ -0.38
CNOT1-215ENST00000569020 NUP107P57740 925 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 RAB10P61026 200 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 TMEM35AQ53FP2 167 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 EMC4Q5J8M3 183 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 MED27Q6P2C8 311 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 ZNF585AQ6P3V2 769 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 ZNF793Q6ZN11 406 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 FAM109AQ8N4B1 249 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 RPRMLQ8N4K4 120 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 ZNF321PQ8N8H1 164 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 OR10Q1Q8NGQ4 319 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 STAG3L4Q8TBR4 150 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 ZNF721Q8TF20 911 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 ZNF473Q8WTR7 871 aaKnown RBP12.65□□□□□ -0.38
CNOT1-215ENST00000569020 UBXN10Q96LJ8 280 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 SMC6Q96SB8 1091 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 MS4A8Q9BY19 250 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 UCK2Q9BZX2 261 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 PNPLA3Q9NST1 481 aa12.65□□□□□ -0.38
CNOT1-215ENST00000569020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.65□□□□□ -0.38
CNOT1-215ENST00000569020 OTOGQ6ZRI0 2925 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 A0A0G2JMM0 328 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 A0A1W2PPB8 328 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 A0A1W2PRS3 328 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 TCRBV9S1A1TA0A576 114 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 KIR3DP1A8MWS1 328 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 RTCAO00442 366 aaKnown RBP12.64□□□□□ -0.39
CNOT1-215ENST00000569020 TOXO94900 526 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 GLSO94925 669 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-215ENST00000569020 SCELO95171 688 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 TGFB1P01137 390 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 IGHG3P01860 377 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 GSTA2P09210 222 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 IGFBP2P18065 325 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 EPORP19235 508 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 HIST1H1TP22492 207 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-215ENST00000569020 ACVR2AP27037 513 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 MSX1P28360 303 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 SERPINB1P30740 379 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 SPRP35270 261 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-215ENST00000569020 CASP2P42575 452 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 SSR2P43308 183 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 MAGEA5P43359 124 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 NR0B1P51843 470 aaKnown RBP12.64□□□□□ -0.39
CNOT1-215ENST00000569020 ID2Q02363 134 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 TFF3Q07654 80 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 BIKQ13323 160 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 E2F2Q14209 437 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 ZKSCAN8Q15776 578 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-215ENST00000569020 MPEG1Q2M385 716 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 GRTP1Q5TC63 336 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 C3orf62Q6ZUJ4 267 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 RAPH1Q70E73 1250 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 CYS1Q717R9 158 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 UBE3DQ7Z6J8 389 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 CCDC71Q8IV32 467 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-215ENST00000569020 CTAGE3PQ8IX95 158 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 LAS2Q8IYD9 372 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 TMEM251Q8N6I4 163 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 ANKRD9Q96BM1 317 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-215ENST00000569020 CMTM7Q96FZ5 175 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 RBM18Q96H35 190 aaKnown RBP12.64□□□□□ -0.39
CNOT1-215ENST00000569020 ART5Q96L15 291 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 DGAT2Q96PD7 388 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 DPH5Q9H2P9 285 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 LDAHQ9H6V9 325 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 SLC24A3Q9HC58 644 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 NPDC1Q9NQX5 325 aaPredicted RBP12.64□□□□□ -0.39
CNOT1-215ENST00000569020 MS4A12Q9NXJ0 267 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 NUDT4Q9NZJ9 180 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 WHRNQ9P202 907 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 OPTCQ9UBM4 332 aa12.64□□□□□ -0.39
CNOT1-215ENST00000569020 NCKAP5O14513 1909 aa12.63□□□□□ -0.39
CNOT1-215ENST00000569020 A0A1B0GVC2 190 aa12.63□□□□□ -0.39
CNOT1-215ENST00000569020 FAM187AA6NFU0 413 aa12.63□□□□□ -0.39
CNOT1-215ENST00000569020 FAM159BA6NKW6 160 aa12.63□□□□□ -0.39
CNOT1-215ENST00000569020 SUPT3HB4E1H0 165 aa12.63□□□□□ -0.39
CNOT1-215ENST00000569020 AQP7O14520 342 aa12.63□□□□□ -0.39
CNOT1-215ENST00000569020 SH3BGRLO75368 114 aa12.63□□□□□ -0.39
CNOT1-215ENST00000569020 SUPT3HO75486 399 aa12.63□□□□□ -0.39
CNOT1-215ENST00000569020 ETHE1O95571 254 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms