RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 PYURFQ96I23 114 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 NEUROD4Q9HD90 331 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 FAM60AQ9NP50 221 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 CLCA2Q9UQC9 943 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 ASB4Q9Y574 426 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 AP4B1Q9Y6B7 739 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 PCDH15Q96QU1 1955 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 SLC9B1P1A6NJY1 282 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 RHPN2P1A8MT19 583 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 CLOCKO15516 846 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 E2F6O75461 281 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 PROS1P07225 676 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 ZNF26P17031 533 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 CPN2P22792 545 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 CCT8P50990 548 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 HNRNPFP52597 415 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 IST1P53990 364 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 BNIP3Q12983 259 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 GCNT6Q5T4J0 391 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 NKAIN2Q5VXU1 208 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 TLDC1Q6P9B6 456 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 ABHD13Q7L211 337 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 ZNF655Q8N720 491 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 CSNK1A1LQ8N752 337 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 ANKFN1Q8N957 763 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 AVL9Q8NBF6 648 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 NFKBIDQ8NI38 313 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 C1orf216Q8TAB5 229 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 NCSTNQ92542 709 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 RAB8BQ92930 207 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 OTUB1Q96FW1 271 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 TGM7Q96PF1 710 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 MAP3K3Q99759 626 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 GLIPR2Q9H4G4 154 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 Q9H521 79 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 GIMAP4Q9NUV9 329 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 RPS6KA6Q9UK32 745 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 BAG5Q9UL15 447 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 TECTAO75443 2155 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 A0A1W2PS29 197 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 C7orf72A4D263 438 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 LMO7DNF2Z398 122 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 hCG_2039718K7EN88 272 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 EI24O14681 340 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 VILLO15195 856 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 HCRTR1O43613 425 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 B3GALT2O43825 422 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 KIF1CO43896 1103 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 NOBOXO60393 691 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 DNAJB6O75190 326 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 PIAS2O75928 621 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 DIRAS1O95057 198 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 MYF5P13349 255 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 ZNF10P21506 573 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 BUD31P41223 144 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 GSTM5P46439 218 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 CCT3P49368 545 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 MVDP53602 400 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 PCBP4P57723 403 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 SIM1P81133 766 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 FOXD4Q12950 439 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 SCARB2Q14108 478 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 TEAD4Q15561 434 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 ATP6AP1Q15904 470 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 AMZ1Q400G9 498 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 PRSS41Q7RTY9 318 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 C6orf120Q7Z4R8 191 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 STK32CQ86UX6 486 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 EPHX4Q8IUS5 362 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 OR4N5Q8IXE1 308 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 ZCCHC7Q8N3Z6 543 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 NATD1Q8N6N6 113 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 PAPD5Q8NDF8 572 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 DNASE2BQ8WZ79 361 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 N4BP2L2Q92802 583 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 SDCCAG3Q96C92 435 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 CNRIP1Q96F85 164 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 AHCYL2Q96HN2 611 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 C9orf16Q9BUW7 83 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 ASPSCR1Q9BZE9 553 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 DUSP15Q9H1R2 295 aaPredicted RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 ZCCHC3Q9NUD5 404 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 SOHLH2Q9NX45 425 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 TRPC4Q9UBN4 977 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 PILRAQ9UKJ1 303 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 POMT2Q9UKY4 750 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 MRPS2Q9Y399 296 aaKnown RBP6.69□□□□□ -1.34
SMG1-215ENST00000568239 ZNF780BQ9Y6R6 833 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 FRYLO94915 3013 aa6.69□□□□□ -1.34
SMG1-215ENST00000568239 MYOCOSA0A1B0GUC4 107 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 MYO1GB0I1T2 1018 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 C5orf58C9J3I9 102 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 PROM1O43490 865 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 LAMTOR5O43504 91 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 NR2F6P10588 404 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 ALOX12P18054 663 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 TSFMP43897 325 aaKnown RBP6.68□□□□□ -1.34
SMG1-215ENST00000568239 FASLGP48023 281 aa6.68□□□□□ -1.34
SMG1-215ENST00000568239 GTF2A1P52655 376 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms