RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 ZPLD1Q8TCW7 415 aa12.58□□□□□ -0.4
SMG1-213ENST00000567737 SLC44A1Q8WWI5 657 aa12.58□□□□□ -0.4
SMG1-213ENST00000567737 LPGAT1Q92604 370 aa12.58□□□□□ -0.4
SMG1-213ENST00000567737 KRT35Q92764 455 aa12.58□□□□□ -0.4
SMG1-213ENST00000567737 UCN3Q969E3 161 aa12.58□□□□□ -0.4
SMG1-213ENST00000567737 SPACA9Q96E40 222 aaPredicted RBP12.58□□□□□ -0.4
SMG1-213ENST00000567737 TRMT61AQ96FX7 289 aaKnown RBP12.58□□□□□ -0.4
SMG1-213ENST00000567737 UGT2B28Q9BY64 529 aa12.58□□□□□ -0.4
SMG1-213ENST00000567737 ANGPTL4Q9BY76 406 aa12.58□□□□□ -0.4
SMG1-213ENST00000567737 OSBPL8Q9BZF1 889 aa12.58□□□□□ -0.4
SMG1-213ENST00000567737 ZFP69BQ9UJL9 534 aa12.58□□□□□ -0.4
SMG1-213ENST00000567737 CRYL1Q9Y2S2 319 aa12.58□□□□□ -0.4
SMG1-213ENST00000567737 PCDHA13Q9Y5I0 950 aa12.58□□□□□ -0.4
SMG1-213ENST00000567737 CLDN16Q9Y5I7 305 aa12.58□□□□□ -0.4
SMG1-213ENST00000567737 CR1P17927 2039 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 NCKAP5O14513 1909 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 ESPNB1AK53 854 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 ACSL3O95573 720 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 GYPCP04921 128 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 CCND1P24385 295 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 GRIA1P42261 906 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 RPS4XP62701 263 aaKnown RBP12.57□□□□□ -0.4
SMG1-213ENST00000567737 GAB1Q13480 694 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 CUL1Q13616 776 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 MRNIPQ6NTE8 343 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 LCTLQ6UWM7 567 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 STRA8Q7Z7C7 330 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 CLNKQ7Z7G1 428 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 ZNF321PQ8N8H1 164 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 FAM13CQ8NE31 585 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 ABTB1Q969K4 478 aaPredicted RBP12.57□□□□□ -0.4
SMG1-213ENST00000567737 ZC3HAV1LQ96H79 300 aaKnown RBP12.57□□□□□ -0.4
SMG1-213ENST00000567737 RUNDC3BQ96NL0 473 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 HAUS8Q9BT25 410 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 PROK2Q9HC23 129 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 CHRAC1Q9NRG0 131 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 TMEM160Q9NX00 188 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 COPS7AQ9UBW8 275 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 MRPS33Q9Y291 106 aaKnown RBP12.57□□□□□ -0.4
SMG1-213ENST00000567737 WIF1Q9Y5W5 379 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 USF3Q68DE3 2245 aa12.57□□□□□ -0.4
SMG1-213ENST00000567737 E7EVH7 732 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 MSTNO14793 375 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 SMNDC1O75940 238 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMG1-213ENST00000567737 TJP3O95049 919 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 HPNP05981 417 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 TNNI3P19429 210 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 LOXP28300 417 aaPredicted RBP12.56□□□□□ -0.4
SMG1-213ENST00000567737 CD79BP40259 229 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 SLCO1A2P46721 670 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 PCYT1AP49585 367 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 CDK9P50750 372 aaKnown RBP12.56□□□□□ -0.4
SMG1-213ENST00000567737 TCEAL1Q15170 157 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 TOMM20Q15388 145 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 PCID2Q5JVF3 399 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 ZNF704Q6ZNC4 412 aaPredicted RBP12.56□□□□□ -0.4
SMG1-213ENST00000567737 ZNF550Q7Z398 422 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 ZNF595Q8IYB9 648 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 DND1Q8IYX4 353 aaKnown RBP12.56□□□□□ -0.4
SMG1-213ENST00000567737 GCNT2Q8N0V5 402 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 ZNF611Q8N823 705 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 ABHD11Q8NFV4 315 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 PTPMT1Q8WUK0 201 aaPredicted RBP12.56□□□□□ -0.4
SMG1-213ENST00000567737 FAR2Q96K12 515 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 MARK4Q96L34 752 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 QRFPRQ96P65 431 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 SHARPINQ9H0F6 387 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 DOCK7Q96N67 2140 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 MEGF8Q7Z7M0 2845 aa12.56□□□□□ -0.4
SMG1-213ENST00000567737 C17orf105B2RV13 164 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 LRATO95237 230 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 SMIM10L1P0DMW3 83 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 ENO3P13929 434 aaPredicted RBP12.55□□□□□ -0.4
SMG1-213ENST00000567737 PTPN7P35236 360 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 AHRP35869 848 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 SCTRP47872 440 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 CLCN7P51798 805 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 GDF10P55107 478 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 MTTPP55157 894 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 RAB38P57729 211 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 BTN3A2P78410 334 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 NAE1Q13564 534 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 TBCELQ5QJ74 424 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 DCST1Q5T197 706 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 LIPNQ5VXI9 398 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 AGTRAPQ6RW13 159 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 SCIMPQ6UWF3 145 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 SLC15A4Q8N697 577 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 GPATCH11Q8N954 259 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 FAM47BQ8NA70 645 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 TMEM52Q8NDY8 209 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 TRPV3Q8NET8 790 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 OR10G3Q8NGC4 313 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 OR4K1Q8NGD4 311 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 SLC2A12Q8TD20 617 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 ANKRD9Q96BM1 317 aaPredicted RBP12.55□□□□□ -0.4
SMG1-213ENST00000567737 SMIM10Q96HG1 83 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 TCF12Q99081 682 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 BPIFA3Q9BQP9 254 aa12.55□□□□□ -0.4
SMG1-213ENST00000567737 SGPP1Q9BX95 441 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms