RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 KCMF1Q9P0J7 381 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 FBXL4Q9UKA2 621 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 KCNMB2Q9Y691 235 aa11.44□□□□□ -0.58
SF3B3-208ENST00000567250 MGAQ8IWI9 3026 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 IGKV3D-11A0A0A0MRZ8 115 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 IGHV1-45A0A0A0MS14 117 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 TCRBV16S1A1N1A0A5B0 115 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 C1orf226A1L170 272 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 TRPC5OSA6NMA1 111 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 FAM227AF5H4B4 570 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 PROM1O43490 865 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 DNAJB6O75190 326 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 SEC22BO75396 215 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 AIFM1O95831 613 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 GBAP04062 536 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 LINC00032P0C843 101 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 COX6A1P12074 109 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 ICAM2P13598 275 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 COX7A2P14406 83 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 MAOAP21397 527 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 OR4D2P58180 307 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 RPL38P63173 70 aaKnown RBP11.43□□□□□ -0.58
SF3B3-208ENST00000567250 PLIN5Q00G26 463 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 BTKQ06187 659 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 AIMP2Q13155 320 aaKnown RBP11.43□□□□□ -0.58
SF3B3-208ENST00000567250 HEPACAMQ14CZ8 416 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 TERF2Q15554 542 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 PDCD2Q16342 344 aaPredicted RBP11.43□□□□□ -0.58
SF3B3-208ENST00000567250 EXT1Q16394 746 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 UGT3A2Q3SY77 523 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 XKR7Q5GH72 579 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 NDUFAF5Q5TEU4 345 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 RIPOR1Q6ZS17 1223 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 LANCL3Q6ZV70 420 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 IKBIPQ70UQ0 350 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 ANKRD37Q7Z713 158 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 TSLPQ969D9 159 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 C8orf44Q96CB5 159 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 ZNF700Q9H0M5 742 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 ING2Q9H160 280 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 TUBB1Q9H4B7 451 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 ADAP2Q9NPF8 381 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 ATP13A2Q9NQ11 1180 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 LHX6Q9UPM6 363 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 WBP11Q9Y2W2 641 aaKnown RBP11.43□□□□□ -0.58
SF3B3-208ENST00000567250 ATG4BQ9Y4P1 393 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 ASB4Q9Y574 426 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 LOC400499M0QZD8 3231 aa11.43□□□□□ -0.58
SF3B3-208ENST00000567250 PCSK5Q92824 1860 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 MKRN2OSH3BPM6 223 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 LSM1O15116 133 aaKnown RBP11.42□□□□□ -0.58
SF3B3-208ENST00000567250 DYRK3O43781 588 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 CTNSO60931 367 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 VPS4BO75351 444 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 ANXA4P09525 319 aaPredicted RBP11.42□□□□□ -0.58
SF3B3-208ENST00000567250 BTG2P78543 158 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 OCRLQ01968 901 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 ACTN3Q08043 901 aaPredicted RBP11.42□□□□□ -0.58
SF3B3-208ENST00000567250 TBR1Q16650 682 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 GALNTL6Q49A17 601 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 SFT2D3Q587I9 215 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 C6orf163Q5TEZ5 329 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 CES4AQ5XG92 561 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 FAM219BQ5XKK7 198 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 PAPD4Q6PIY7 484 aaKnown RBP11.42□□□□□ -0.58
SF3B3-208ENST00000567250 CLNKQ7Z7G1 428 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 CRLF3Q8IUI8 442 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 PARP9Q8IXQ6 854 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 LRRC34Q8IZ02 419 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 TMEM132CQ8N3T6 1108 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 OR2T11Q8NH01 316 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 PIWIL2Q8TC59 973 aaKnown RBP11.42□□□□□ -0.58
SF3B3-208ENST00000567250 ZNF75CPQ92670 426 aaPredicted RBP11.42□□□□□ -0.58
SF3B3-208ENST00000567250 EXTL1Q92935 676 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 TUBGCP3Q96CW5 907 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 C11orf24Q96F05 449 aaPredicted RBP11.42□□□□□ -0.58
SF3B3-208ENST00000567250 C7orf26Q96N11 449 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 EBPLQ9BY08 206 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 C20orf27Q9GZN8 174 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 ADNPQ9H2P0 1102 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 ZNF160Q9HCG1 818 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 MYNNQ9NPC7 610 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 NECTIN3Q9NQS3 549 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 TEX10Q9NXF1 929 aaPredicted RBP11.42□□□□□ -0.58
SF3B3-208ENST00000567250 VTI1BQ9UEU0 232 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 TUBD1Q9UJT1 453 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 PSME2Q9UL46 239 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 CCL27Q9Y4X3 112 aa11.42□□□□□ -0.58
SF3B3-208ENST00000567250 POLR3HQ9Y535 204 aaPredicted RBP11.42□□□□□ -0.58
SF3B3-208ENST00000567250 A0A1W2PR48 441 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 SAGE2PA6NJ88 616 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 HDAC3O15379 428 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 LDB3O75112 727 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 IFNA16P05015 189 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 ALPPP05187 535 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 SFTPCP11686 197 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 DRD2P14416 443 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 DDX5P17844 614 aaKnown RBP11.41□□□□□ -0.58
SF3B3-208ENST00000567250 ITGA3P26006 1051 aa11.41□□□□□ -0.58
SF3B3-208ENST00000567250 PIK3R1P27986 724 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms