RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 SPATS1Q496A3 300 aa16.72■□□□□ 0.27
HERC2-208ENST00000566635 SLC48A1Q6P1K1 146 aa16.72■□□□□ 0.27
HERC2-208ENST00000566635 GPR155Q7Z3F1 870 aa16.72■□□□□ 0.27
HERC2-208ENST00000566635 CARFQ8N187 725 aa16.72■□□□□ 0.27
HERC2-208ENST00000566635 OR5AK3PQ8NH89 298 aa16.72■□□□□ 0.27
HERC2-208ENST00000566635 SH3GL1Q99961 368 aa16.72■□□□□ 0.27
HERC2-208ENST00000566635 CXorf36Q9H7Y0 433 aa16.72■□□□□ 0.27
HERC2-208ENST00000566635 TPT1P8Q9HAU6 139 aa16.72■□□□□ 0.27
HERC2-208ENST00000566635 SLC35C2Q9NQQ7 365 aa16.72■□□□□ 0.27
HERC2-208ENST00000566635 TAS2R9Q9NYW1 312 aa16.72■□□□□ 0.27
HERC2-208ENST00000566635 ZNF282Q9UDV7 671 aaPredicted RBP16.72■□□□□ 0.27
HERC2-208ENST00000566635 PHF11Q9UIL8 331 aa16.72■□□□□ 0.27
HERC2-208ENST00000566635 PCDHGB4Q9UN71 923 aa16.72■□□□□ 0.27
HERC2-208ENST00000566635 ZCCHC18P0CG32 403 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 SOAT1P35610 550 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 MRPS22P82650 360 aaKnown RBP16.71■□□□□ 0.27
HERC2-208ENST00000566635 TRAP1Q12931 704 aaKnown RBP16.71■□□□□ 0.27
HERC2-208ENST00000566635 SNCBQ16143 134 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 TMEM71Q6P5X7 295 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 DHFR2Q86XF0 187 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 ZFP90Q8TF47 636 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 CNRIP1Q96F85 164 aaPredicted RBP16.71■□□□□ 0.27
HERC2-208ENST00000566635 SLC41A2Q96JW4 573 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 SLC35A5Q9BS91 424 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 LRRN3Q9H3W5 708 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 RNPEPL1Q9HAU8 725 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 ANKHQ9HCJ1 492 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 TAS2R7Q9NYW3 318 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 RALGAPA1Q6GYQ0 2036 aa16.71■□□□□ 0.27
HERC2-208ENST00000566635 A0A0A6YYC8 382 aaPredicted RBP16.7■□□□□ 0.26
HERC2-208ENST00000566635 TMEM150CB9EJG8 249 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 I3L1I5 382 aaPredicted RBP16.7■□□□□ 0.26
HERC2-208ENST00000566635 TXNDC9O14530 226 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 C8orf89P0DMQ9 161 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 FOLR1P15328 257 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 HTR1EP28566 365 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 BUD31P41223 144 aaPredicted RBP16.7■□□□□ 0.26
HERC2-208ENST00000566635 CDK9P50750 372 aaKnown RBP16.7■□□□□ 0.26
HERC2-208ENST00000566635 MANFP55145 182 aaKnown RBP16.7■□□□□ 0.26
HERC2-208ENST00000566635 SHC2P98077 582 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 LAIR1Q6GTX8 287 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 SPATA24Q86W54 205 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 CALHM3Q86XJ0 350 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 PTRH1Q86Y79 214 aaKnown RBP16.7■□□□□ 0.26
HERC2-208ENST00000566635 CA13Q8N1Q1 262 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 D2HGDHQ8N465 521 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 METTL27Q8N6F8 245 aaPredicted RBP16.7■□□□□ 0.26
HERC2-208ENST00000566635 OR2T12Q8NG77 320 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 GLIPR2Q9H4G4 154 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 SNX8Q9Y5X2 465 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 SCN2AQ99250 2005 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 HYKKA2RU49 373 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 AGRPO00253 132 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 CPNE6O95741 557 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 NTRK1P04629 796 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 DDX5P17844 614 aaKnown RBP16.7■□□□□ 0.26
HERC2-208ENST00000566635 GZMMP51124 257 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 CASP9P55211 416 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 SIM1P81133 766 aaPredicted RBP16.7■□□□□ 0.26
HERC2-208ENST00000566635 SF3A2Q15428 464 aaKnown RBP16.7■□□□□ 0.26
HERC2-208ENST00000566635 FXNQ16595 210 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 TMEM52Q8NDY8 209 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 OR5P2Q8WZ92 322 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 FAM120BQ96EK7 910 aaKnown RBP16.7■□□□□ 0.26
HERC2-208ENST00000566635 ZNF768Q9H5H4 540 aaKnown RBP16.7■□□□□ 0.26
HERC2-208ENST00000566635 LYRM4Q9HD34 91 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 SNX13Q9Y5W8 968 aa16.7■□□□□ 0.26
HERC2-208ENST00000566635 EVPLLA8MZ36 301 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 H3BMH7 237 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 FOXS1O43638 330 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 NELFEP18615 380 aaKnown RBP16.69■□□□□ 0.26
HERC2-208ENST00000566635 NTSP30990 170 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 FEN1P39748 380 aaKnown RBP16.69■□□□□ 0.26
HERC2-208ENST00000566635 NCBP2P52298 156 aaKnown RBP eCLIP16.69■□□□□ 0.26
HERC2-208ENST00000566635 TCTE1Q5JU00 501 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 ANGPTL8Q6UXH0 198 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 SPPL2CQ8IUH8 684 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 NATD1Q8N6N6 113 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 RCBTB1Q8NDN9 531 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 OR1L3Q8NH93 324 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 ZBED6CLQ96FA7 236 aaPredicted RBP16.69■□□□□ 0.26
HERC2-208ENST00000566635 AMDHD1Q96NU7 426 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 BBS4Q96RK4 519 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 DCLRE1BQ9H816 532 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 S100A14Q9HCY8 104 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 SIRT3Q9NTG7 399 aaPredicted RBP16.69■□□□□ 0.26
HERC2-208ENST00000566635 ACTR3BQ9P1U1 418 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 HCN3Q9P1Z3 774 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 ENTPD4Q9Y227 616 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 PCDHB3Q9Y5E6 796 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 CACNA1HO95180 2353 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 FAM220BPB1ANY3 271 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 ZNF883P0CG24 379 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 SQSTM1Q13501 440 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 NDUFA9Q16795 377 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.69■□□□□ 0.26
HERC2-208ENST00000566635 LCN8Q6JVE9 175 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 ENDOVQ8N8Q3 282 aaKnown RBP16.69■□□□□ 0.26
HERC2-208ENST00000566635 SUN3Q8TAQ9 357 aa16.69■□□□□ 0.26
HERC2-208ENST00000566635 RBCK1Q9BYM8 510 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms