RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SOX18P35713 384 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 GRIA1P42261 906 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 RPL21P46778 160 aaKnown RBP8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 TRPC1P48995 793 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 TTPAP49638 278 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 GPR143P51810 404 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 ARL4CP56559 192 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 PRAMEP78395 509 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 ACVR1Q04771 509 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 BMPR2Q13873 1038 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 DEFB134Q4QY38 66 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 TSTD2Q5T7W7 516 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 LIPNQ5VXI9 398 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 HSDL2Q6YN16 418 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 LRRC6Q86X45 466 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 LMNTD2Q8IXW0 634 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 TMEM132CQ8N3T6 1108 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 AFAP1L2Q8N4X5 818 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 EIF1ADQ8N9N8 165 aaKnown RBP8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 PPFIBP2Q8ND30 876 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 OR5L2Q8NGL0 311 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 MBD3L2Q8NHZ7 208 aaPredicted RBP8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 ZNF480Q8WV37 535 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 TRMT61AQ96FX7 289 aaKnown RBP8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 SCYL1Q96KG9 808 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 SIGLEC10Q96LC7 697 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 KCNK17Q96T54 332 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 WDR83Q9BRX9 315 aaKnown RBP8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 SFXN3Q9BWM7 321 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 PCBD2Q9H0N5 130 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 SLC6A15Q9H2J7 730 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 PIGMQ9H3S5 423 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 SOX13Q9UN79 622 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 CAMK2AQ9UQM7 478 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 SNX24Q9Y343 169 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 TESMINQ9Y4I5 508 aa8.31□□□□□ -1.08
VPS9D1-205ENST00000565452 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.3□□□□□ -1.082e-7■■■■□ 25.1
VPS9D1-205ENST00000565452 A8MXE2 369 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 E7ESA3 106 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 PRKNO60260 465 aaPredicted RBP8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 LCMT2O60294 686 aaKnown RBP8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 PSIP1O75475 530 aaKnown RBP8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 NDUFS3O75489 264 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 SLC16A8O95907 504 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 RFPL3SP0C7P2 107 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 RNH1P13489 461 aaKnown RBP8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 CRYGSP22914 178 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 ATP5DP30049 168 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 PIGAP37287 484 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 PCYT1AP49585 367 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 SESN2P58004 480 aaPredicted RBP8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 KCNJ2P63252 427 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 OLR1P78380 273 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 OCRLQ01968 901 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 ILF2Q12905 390 aaKnown RBP8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 DUSP8Q13202 625 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 PWP1Q13610 501 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 CUL1Q13616 776 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 RCAN2Q14206 197 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 BBS9Q3SYG4 887 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 ANKRD22Q5VYY1 191 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 CYS1Q717R9 158 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 CENPUQ71F23 418 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 ZNF534Q76KX8 674 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 IFT20Q8IY31 132 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 OR13J1Q8NGT2 312 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 CALML6Q8TD86 181 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 TCF12Q99081 682 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 SLC30A3Q99726 388 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 MED18Q9BUE0 208 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 TRIM31Q9BZY9 425 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 PRDM14Q9GZV8 571 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 RHBGQ9H310 441 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 ACBD3Q9H3P7 528 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 CHRAC1Q9NRG0 131 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 TMEM160Q9NX00 188 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 TSR3Q9UJK0 312 aaKnown RBP8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 ZNF223Q9UK11 482 aaPredicted RBP8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 MMACHCQ9Y4U1 282 aa8.3□□□□□ -1.08
VPS9D1-205ENST00000565452 TP73O15350 636 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 CD3EAPO15446 510 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 SIAH2O43255 324 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 ZBTB14O43829 449 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 TRAPPC6AO75865 159 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 RCBTB2O95199 551 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 SLU7O95391 586 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 SYF2O95926 243 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 TUBBP07437 444 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 GSTA2P09210 222 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 CCL3P10147 92 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 MGAT1P26572 445 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 PLTPP55058 493 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 EIF3BP55884 814 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 GUCY2DQ02846 1103 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 CRYZQ08257 329 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 GAB1Q13480 694 aa8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 FRG1Q14331 258 aaKnown RBP8.29□□□□□ -1.08
VPS9D1-205ENST00000565452 KLHL38Q2WGJ6 581 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms