RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 EXO1Q9UQ84 846 aaKnown RBP19.56■□□□□ 0.72
MAP1LC3B-206ENST00000564844 HOXB6P17509 224 aaKnown RBP19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 MVDP53602 400 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 GLYR1Q49A26 553 aaPredicted RBP19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 GHDCQ8N2G8 530 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 GTF3C2Q8WUA4 911 aaPredicted RBP19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 MED30Q96HR3 178 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RIPOR3Q96MK2 946 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ZAR1LA6NP61 321 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ISM1B1AKI9 464 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PRKACBP22694 351 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CTBP2P56545 445 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 C2orf80Q0P641 193 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CRTC1Q6UUV9 634 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 L3MBTL4Q8NA19 623 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SLC12A9Q9BXP2 914 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TBC1D17Q9HA65 648 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 LOC105371267A0A1B0GV96 52 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 A8MUA0 341 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 OPRD1P41143 372 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SMAD3P84022 425 aaKnown RBP19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PUM1Q14671 1186 aaKnown RBP eCLIP19.55■□□□□ 0.722e-6■■■□□ 17
MAP1LC3B-206ENST00000564844 CNIH2Q6PI25 160 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 C19orf48Q6RUI8 117 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 GPR155Q7Z3F1 870 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 BRD9Q9H8M2 597 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SEC14L4Q9UDX3 406 aa19.55■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CIB4A0PJX0 185 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CASKO14936 926 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 IGHA2P01877 340 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PSMA3P25788 255 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 HOXC8P31273 242 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SLC6A12P48065 614 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TEAD4Q15561 434 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PRSS53Q2L4Q9 553 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 DDI2Q5TDH0 399 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 LHFPL3Q86UP9 236 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RDH10Q8IZV5 341 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 FAM109AQ8N4B1 249 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 WDR48Q8TAF3 677 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 UPRTQ96BW1 309 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 DCLRE1CQ96SD1 692 aaKnown RBP19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 MKRN2Q9H000 416 aaKnown RBP19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ZNF840PA6NDX5 716 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 BCHEP06276 602 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ALAS2P22557 587 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SOX18P35713 384 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 MAP2K3P46734 347 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 XKP51811 444 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PIN1Q13526 163 aaPredicted RBP19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 MRPL58Q14197 206 aaKnown RBP19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PXDC1Q5TGL8 231 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 LAS2Q8IYD9 372 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 REPS1Q96D71 796 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SYT17Q9BSW7 474 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TMED9Q9BVK6 235 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 B3GAT2Q9NPZ5 323 aa19.54■□□□□ 0.72
MAP1LC3B-206ENST00000564844 COL4A4P53420 1690 aaPredicted RBP19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 C2orf92A0A1B0GVN3 265 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 HEPACAM2A8MVW5 462 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PRKYO43930 277 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 IFNW1P05000 195 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 OR56A5P0C7T3 313 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 OR1D2P34982 312 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CTSOP43234 321 aaPredicted RBP19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 XCR1P46094 333 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 GSTM5P46439 218 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 GZMKP49863 264 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RBBP4Q09028 425 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ASAH1Q13510 395 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 LCN1P1Q5VSP4 162 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 CEACAM20Q6UY09 585 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 OR6C4Q8NGE1 309 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ZFAND1Q8TCF1 268 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SLC25A46Q96AG3 418 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 OR4K3Q96R72 315 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 PRR14Q9BWN1 585 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 POLR2J3Q9H1A7 115 aaKnown RBP19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ANKDD1BA6NHY2 528 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 DVL2O14641 736 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 POLR1CO15160 346 aaPredicted RBP19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SYPP08247 313 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RPS5P46782 204 aaKnown RBP19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TLE2Q04725 743 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 C1DQ13901 141 aaKnown RBP19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ZNF284Q2VY69 593 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 OR8H3Q8N146 312 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 DNAJC5GQ8N7S2 189 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 OR7G3Q8NG95 312 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 OTULINQ96BN8 352 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 ART5Q96L15 291 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 HHIPQ96QV1 700 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 LSM2Q9Y333 95 aaKnown RBP19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 HYKKA2RU49 373 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 WASHC1A8K0Z3 465 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 SEMA7AO75326 666 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 NTN1O95631 604 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 LHCGRP22888 699 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 TAS2R50P59544 299 aa19.53■□□□□ 0.72
MAP1LC3B-206ENST00000564844 RASSF5Q8WWW0 418 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms