RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 MERTKQ12866 999 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ILF3Q12906 894 aaKnown RBP eCLIP7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 EPS8Q12929 822 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 GAB1Q13480 694 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 BIRC2Q13490 618 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TRIP6Q15654 476 aaKnown RBP7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ADRM1Q16186 407 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SOWAHCQ53LP3 525 aaPredicted RBP7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ZNF385BQ569K4 471 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 NHSL2Q5HYW2 709 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CCNYL2Q5T2Q4 361 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 GCNT6Q5T4J0 391 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 DEPDC1Q5TB30 811 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TMEM214Q6NUQ4 689 aaKnown RBP7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SLC30A9Q6PML9 568 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ANGPTL8Q6UXH0 198 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CLEC4FQ8N1N0 589 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SLC25A45Q8N413 288 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 DHRSXQ8N5I4 330 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 FAM86B1Q8N7N1 296 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OR4C6Q8NH72 309 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 GOT1L1Q8NHS2 421 aaPredicted RBP7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 MAGEE2Q8TD90 523 aaPredicted RBP7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ZFP90Q8TF47 636 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CYGBQ8WWM9 190 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TFAP2CQ92754 450 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 RGMAQ96B86 450 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 RMND5BQ96G75 393 aaPredicted RBP7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SCARF2Q96GP6 870 aaPredicted RBP7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PYURFQ96I23 114 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 RDH12Q96NR8 316 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CDC6Q99741 560 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SLC35A5Q9BS91 424 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 MENTQ9BUN1 341 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 GSDMCQ9BYG8 508 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OCEL1Q9H607 264 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 MRPS30Q9NP92 439 aaKnown RBP7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 NLGN3Q9NZ94 848 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 NDUFA13Q9P0J0 144 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ADAM29Q9UKF5 820 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 MYRFQ9Y2G1 1151 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 WDR37Q9Y2I8 494 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 DGKBQ9Y6T7 804 aa7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 MDC1Q14676 2089 aaKnown RBP7.07□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SMIM31A0A1B0GVY4 71 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 A0A1W2PRB8 838 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 C1orf226A1L170 272 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CPED1A4D0V7 1026 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 LMO7DNF2Z398 122 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 H0YAE9 185 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 H7BY64 318 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PLPP1O14494 284 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 YY2O15391 372 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PDPK1O15530 556 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OR1F1O43749 312 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 E2F6O75461 281 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CLEC3AO75596 197 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 KRT75O95678 551 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 C6orf47O95873 294 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CLPTM1O96005 669 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 GBAP04062 536 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ABCB1P08183 1280 aaPredicted RBP7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 THRBP10828 461 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TPP2P29144 1249 aaPredicted RBP7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CMPK1P30085 196 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SHMT2P34897 504 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CHI3L1P36222 383 aaPredicted RBP7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 RPL5P46777 297 aaKnown RBP7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ARSFP54793 590 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TRA2BP62995 288 aaKnown RBP7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 CSNK1G2P78368 415 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PRDX1Q06830 199 aaKnown RBP7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 FADDQ13158 208 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 APOFQ13790 326 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 VEZF1Q14119 521 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 GK3PQ14409 553 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 MYBPC3Q14896 1274 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 RGNQ15493 299 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 RPE65Q16518 533 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 NKG7Q16617 165 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 LIN52Q52LA3 116 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TMEM35AQ53FP2 167 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OTUD3Q5T2D3 398 aaPredicted RBP7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TRIM40Q6P9F5 258 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 IYDQ6PHW0 289 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 TTC33Q6PID6 262 aaPredicted RBP7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 PTOV1Q86YD1 416 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ZDHHC13Q8IUH4 622 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 ZDHHC21Q8IVQ6 265 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 SLC30A8Q8IWU4 369 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 C10orf111Q8N326 155 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 FAM47BQ8NA70 645 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 LINC01555Q8NAE3 123 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 C11orf65Q8NCR3 313 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 FAM46DQ8NEK8 389 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OR4K1Q8NGD4 311 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OR52N2Q8NGI0 321 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OR52E1Q8NGJ3 308 aa7.06□□□□□ -1.28
MAP1LC3B-205ENST00000564638 OR5K1Q8NHB7 308 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms