RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CFIP05156 583 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 UMPSP11172 480 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 UQCRC2P22695 453 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 PSMA4P25789 261 aaKnown RBP17.06■□□□□ 0.32
COMMD4-208ENST00000563220 PEX2P28328 305 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 SOAT1P35610 550 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 GABRA4P48169 554 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 CDK9P50750 372 aaKnown RBP17.06■□□□□ 0.32
COMMD4-208ENST00000563220 LIM2P55344 173 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 OLR1P78380 273 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 DUSP2Q05923 314 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 HSPB3Q12988 150 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 TRIP10Q15642 601 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 VMACQ2NL98 169 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 ZC3H12BQ5HYM0 836 aaKnown RBP17.06■□□□□ 0.32
COMMD4-208ENST00000563220 TBCELQ5QJ74 424 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 ARHGEF39Q8N4T4 335 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 Q8N9G6 341 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-208ENST00000563220 OR52N2Q8NGI0 321 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 CNRIP1Q96F85 164 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-208ENST00000563220 ZBED6CLQ96FA7 236 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-208ENST00000563220 AHCYL2Q96HN2 611 aaKnown RBP17.06■□□□□ 0.32
COMMD4-208ENST00000563220 AMDHD1Q96NU7 426 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 KLHL3Q9UH77 587 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 PADI4Q9UM07 663 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 DAPP1Q9UN19 280 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 CORO2BQ9UQ03 480 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 SNX8Q9Y5X2 465 aa17.06■□□□□ 0.32
COMMD4-208ENST00000563220 TNRC6BQ9UPQ9 1833 aaKnown RBP17.06■□□□□ 0.32
COMMD4-208ENST00000563220 TP53BP1Q12888 1972 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-208ENST00000563220 TLCD2A6NGC4 264 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 ZNF860A6NHJ4 632 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 B3GALT2O43825 422 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 IL10P22301 178 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 MLC1Q15049 377 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 AMZ1Q400G9 498 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 HMBOX1Q6NT76 420 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 ANGPTL8Q6UXH0 198 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 OR52E4Q8NGH9 312 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 FAM162AQ96A26 154 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 ZDHHC12Q96GR4 267 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 C10orf90Q96M02 699 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 SEPHS2Q99611 448 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 EFHD1Q9BUP0 239 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 RAPGEFL1Q9UHV5 662 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 ANAPC2Q9UJX6 822 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 SLC22A7Q9Y694 548 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 TMEM131Q92545 1883 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 MYO1GB0I1T2 1018 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 SRPX2O60687 465 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-208ENST00000563220 B4GALT2O60909 372 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 C8orf89P0DMQ9 161 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 ETFAP13804 333 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 CPN2P22792 545 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 CNR2P34972 360 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 CHI3L1P36222 383 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-208ENST00000563220 CRATP43155 626 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 GPR3P46089 330 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 NR1D2Q14995 579 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 PRTGQ2VWP7 1150 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 OGFRL1Q5TC84 451 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-208ENST00000563220 USP53Q70EK8 1073 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 AMIGO2Q86SJ2 522 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 RNF130Q86XS8 419 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 FAM86B1Q8N7N1 296 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 PAPD5Q8NDF8 572 aaKnown RBP17.05■□□□□ 0.32
COMMD4-208ENST00000563220 PSMA8Q8TAA3 256 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 SUN3Q8TAQ9 357 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 NCLNQ969V3 563 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 CSF3RQ99062 836 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 SEMA6AQ9H2E6 1030 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 GAREM1Q9H706 876 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 CAPN10Q9HC96 672 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 ZSCAN32Q9NX65 697 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 NAALAD2Q9Y3Q0 740 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 MAP4K5Q9Y4K4 846 aa17.05■□□□□ 0.32
COMMD4-208ENST00000563220 SCN3AQ9NY46 2000 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 ARID1BQ8NFD5 2236 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-208ENST00000563220 GALR3O60755 368 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-208ENST00000563220 TNFRSF21O75509 655 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 SP9P0CG40 484 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 NR2F6P10588 404 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 ZNF10P21506 573 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-208ENST00000563220 CD1CP29017 333 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 FEN1P39748 380 aaKnown RBP17.04■□□□□ 0.32
COMMD4-208ENST00000563220 NCBP2P52298 156 aaKnown RBP eCLIP17.04■□□□□ 0.322e-6■■□□□ 13
COMMD4-208ENST00000563220 MTX3Q5HYI7 312 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 ERICH5Q6P6B1 374 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 ENPP6Q6UWR7 440 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 CCDC116Q8IYX3 515 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 ZBTB44Q8NCP5 570 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 OR5T3Q8NGG3 340 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 OR2I1PQ8NGU4 316 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 FBXO30Q8TB52 745 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 MAL2Q969L2 176 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 ZNF681Q96N22 645 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 BBS4Q96RK4 519 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 ZNF184Q99676 751 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-208ENST00000563220 NLNQ9BYT8 704 aa17.04■□□□□ 0.32
COMMD4-208ENST00000563220 NEUROD4Q9HD90 331 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms