RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 TRGV8A0A0C4DH27 118 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 A0A1B0GUH1 482 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 H0YIV9 168 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 SAP18O00422 153 aaKnown RBP14.87□□□□□ -0.03
LMX1B-204ENST00000561065 ZNF500O60304 480 aaPredicted RBP14.87□□□□□ -0.03
LMX1B-204ENST00000561065 SCELO95171 688 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 FAM153BP0C7A2 387 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 ATP5A1P25705 553 aaKnown RBP14.87□□□□□ -0.03
LMX1B-204ENST00000561065 CA7P43166 264 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 CLCN2P51788 898 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 RAP1GDS1P52306 607 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 NAA20P61599 178 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 GTF3C1Q12789 2109 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 FAM153CQ494X1 144 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 TTC19Q6DKK2 380 aaPredicted RBP14.87□□□□□ -0.03
LMX1B-204ENST00000561065 SLC25A25Q6KCM7 469 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 SLC22A9Q8IVM8 553 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 CHERPQ8IWX8 916 aaKnown RBP14.87□□□□□ -0.03
LMX1B-204ENST00000561065 PLD6Q8N2A8 252 aaKnown RBP14.87□□□□□ -0.03
LMX1B-204ENST00000561065 CPSF7Q8N684 471 aaKnown RBP14.87□□□□□ -0.03
LMX1B-204ENST00000561065 ZNF321PQ8N8H1 164 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 ITLN2Q8WWU7 325 aaPredicted RBP14.87□□□□□ -0.03
LMX1B-204ENST00000561065 CCDC126Q96EE4 140 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 VMP1Q96GC9 406 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 CCDC120Q96HB5 630 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 DEFB126Q9BYW3 111 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 LYRM4Q9HD34 91 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 XPR1Q9UBH6 696 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 STK38LQ9Y2H1 464 aa14.87□□□□□ -0.03
LMX1B-204ENST00000561065 LDB3O75112 727 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 SLU7O95391 586 aaKnown RBP14.86□□□□□ -0.03
LMX1B-204ENST00000561065 OTCP00480 354 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 TGFB1P01137 390 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 TUBBP07437 444 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 KRT15P19012 456 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 CYB561P49447 251 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 HLCSP50747 726 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 HSF1Q00613 529 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 ID2Q02363 134 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 C3AR1Q16581 482 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 MAPKAPK3Q16644 382 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 DEPDC1Q5TB30 811 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 KHDRBS2Q5VWX1 349 aaKnown RBP14.86□□□□□ -0.03
LMX1B-204ENST00000561065 MILR1Q7Z6M3 343 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 HOMEZQ8IX15 550 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 HORMAD2Q8N7B1 307 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 ACOT4Q8N9L9 421 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 SREK1Q8WXA9 508 aaKnown RBP14.86□□□□□ -0.03
LMX1B-204ENST00000561065 NTMT1Q9BV86 223 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 TXLNGYQ9BZA5 131 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 OR51B5Q9H339 312 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 NOL11Q9H8H0 719 aaKnown RBP14.86□□□□□ -0.03
LMX1B-204ENST00000561065 LIN28AQ9H9Z2 209 aaKnown RBP14.86□□□□□ -0.03
LMX1B-204ENST00000561065 DMRT3Q9NQL9 472 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 ZNF358Q9NW07 568 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 TINAGQ9UJW2 476 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 FBXW2Q9UKT8 454 aa14.86□□□□□ -0.03
LMX1B-204ENST00000561065 FBN2P35556 2912 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 LRBAP50851 2863 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 CCDC151A5D8V7 595 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 NPIPA5E9PKD4 350 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 FOXE1O00358 373 aaPredicted RBP14.85□□□□□ -0.03
LMX1B-204ENST00000561065 DYRK3O43781 588 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 SLC19A2O60779 497 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 ITGA10O75578 1167 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 SIX3O95343 332 aaPredicted RBP14.85□□□□□ -0.03
LMX1B-204ENST00000561065 HIST1H1TP22492 207 aaPredicted RBP14.85□□□□□ -0.03
LMX1B-204ENST00000561065 ALDH6A1Q02252 535 aaKnown RBP14.85□□□□□ -0.03
LMX1B-204ENST00000561065 IFT88Q13099 833 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 DDX39BQ13838 428 aaKnown RBP14.85□□□□□ -0.03
LMX1B-204ENST00000561065 RASA2Q15283 850 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 ELAVL1Q15717 326 aaKnown RBP14.85□□□□□ -0.03
LMX1B-204ENST00000561065 CPSF6Q16630 551 aaKnown RBP eCLIP14.85□□□□□ -0.03
LMX1B-204ENST00000561065 OR4C11Q6IEV9 310 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 MDGA2Q7Z553 956 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 GOLGA7Q7Z5G4 137 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 FGD2Q7Z6J4 655 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 TDRPQ86YL5 185 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 L3MBTL4Q8NA19 623 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 MYRIPQ8NFW9 859 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 HUS1BQ8NHY5 278 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 PTPMT1Q8WUK0 201 aaPredicted RBP14.85□□□□□ -0.03
LMX1B-204ENST00000561065 SERPINI1Q99574 410 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 ZNF717Q9BY31 904 aaPredicted RBP14.85□□□□□ -0.03
LMX1B-204ENST00000561065 GRID1Q9ULK0 1009 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 NPIPA1Q9UND3 350 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 ZNF835Q9Y2P0 537 aa14.85□□□□□ -0.03
LMX1B-204ENST00000561065 CACNA1CQ13936 2221 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 CCL21O00585 134 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 PLPP1O14494 284 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 FCHO1O14526 889 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 FGF17O60258 216 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 CTNSO60931 367 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 CDH16O75309 829 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 PRKRAO75569 313 aaKnown RBP14.84□□□□□ -0.03
LMX1B-204ENST00000561065 ETHE1O95571 254 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 ZNF24P17028 368 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 RFC3P40938 356 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 SSR2P43308 183 aa14.84□□□□□ -0.03
LMX1B-204ENST00000561065 ADORA2A-AS1P86434 159 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms