RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 OR8D2Q9GZM6 311 aa17.09■□□□□ 0.33
TPM1-226ENST00000560959 PITHD1Q9GZP4 211 aaPredicted RBP17.09■□□□□ 0.33
TPM1-226ENST00000560959 NT5DC2Q9H857 520 aa17.09■□□□□ 0.33
TPM1-226ENST00000560959 BOKQ9UMX3 212 aaPredicted RBP17.09■□□□□ 0.33
TPM1-226ENST00000560959 DAPP1Q9UN19 280 aa17.09■□□□□ 0.33
TPM1-226ENST00000560959 SLC22A14Q9Y267 594 aa17.09■□□□□ 0.33
TPM1-226ENST00000560959 JMJD1CQ15652 2540 aa17.08■□□□□ 0.33
TPM1-226ENST00000560959 FN1P02751 2386 aaKnown RBP17.08■□□□□ 0.33
TPM1-226ENST00000560959 IL2RAP01589 272 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 AHSGP02765 367 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 TERF1P54274 439 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 LIM2P55344 173 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 STX4Q12846 297 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 PDAP1Q13442 181 aaKnown RBP17.08■□□□□ 0.32
TPM1-226ENST00000560959 ADGRD1Q6QNK2 874 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 TMIGD1Q6UXZ0 262 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 CLNKQ7Z7G1 428 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 CNTN4Q8IWV2 1026 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 AGGF1Q8N302 714 aaeCLIP17.08■□□□□ 0.32
TPM1-226ENST00000560959 FAM47BQ8NA70 645 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 TNIP2Q8NFZ5 429 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 OR2L5Q8NG80 312 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 SLC2A12Q8TD20 617 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 NUDT8Q8WV74 236 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 ANKRD7Q92527 254 aa17.08■□□□□ 0.32
TPM1-226ENST00000560959 C17orf105B2RV13 164 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 ARHGEF9O43307 516 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 CLEC3AO75596 197 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 KRT14P02533 472 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 CCDC175P0C221 793 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 RFPL3SP0C7P2 107 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 C1GALT1C1LP0DN25 315 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 GNAZP19086 355 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 HNRNPH1P31943 449 aaKnown RBP17.07■□□□□ 0.32
TPM1-226ENST00000560959 PIGAP37287 484 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 VPS41P49754 854 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 MTTPP55157 894 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 CDKL1Q00532 357 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 PCBP2Q15366 365 aaKnown RBP eCLIP17.07■□□□□ 0.32
TPM1-226ENST00000560959 PPP1R3AQ16821 1122 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 ACSF3Q4G176 576 aaPredicted RBP17.07■□□□□ 0.32
TPM1-226ENST00000560959 RBM20Q5T481 1227 aaKnown RBP17.07■□□□□ 0.32
TPM1-226ENST00000560959 SBSNQ6UWP8 590 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.07■□□□□ 0.32
TPM1-226ENST00000560959 ZNF321PQ8N8H1 164 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 REXO4Q9GZR2 422 aaKnown RBP17.07■□□□□ 0.32
TPM1-226ENST00000560959 ZNF395Q9H8N7 513 aaPredicted RBP17.07■□□□□ 0.32
TPM1-226ENST00000560959 CNIH4Q9P003 139 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 COPS7AQ9UBW8 275 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 CORO1CQ9ULV4 474 aaPredicted RBP17.07■□□□□ 0.32
TPM1-226ENST00000560959 GUCA1BQ9UMX6 200 aa17.07■□□□□ 0.32
TPM1-226ENST00000560959 CLCA1A8K7I4 914 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 GOLGA8MH3BSY2 632 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 TTC4O95801 387 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 TNNI3P19429 210 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 HNMTP50135 292 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 TRIM40Q6P9F5 258 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 ABHD17CQ6PCB6 329 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 SLCO4C1Q6ZQN7 724 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 PM20D2Q8IYS1 436 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 KRT78Q8N1N4 520 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 LIX1Q8N485 282 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 SLC22A8Q8TCC7 542 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 ZNF721Q8TF20 911 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 CAPS2Q9BXY5 557 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 LYRM4Q9HD34 91 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 JKAMPQ9P055 326 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 VWA7Q9Y334 891 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 IKBKGQ9Y6K9 419 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 MPDZO75970 2070 aa17.06■□□□□ 0.32
TPM1-226ENST00000560959 A0A0G2JN53 185 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 KIAA1324LA8MWY0 1029 aaPredicted RBP17.05■□□□□ 0.32
TPM1-226ENST00000560959 LY6G6DO95868 133 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 IL18BPO95998 194 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 HRGP04196 525 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 PGAM1P18669 254 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 ZNF136P52737 540 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 PLA2G16P53816 162 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 KCNJ2P63252 427 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 ASPHQ12797 758 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 BIKQ13323 160 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 NSUN5P2Q63ZY6 315 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 LYPD8Q6UX82 237 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 CXorf67Q86X51 503 aaPredicted RBP17.05■□□□□ 0.32
TPM1-226ENST00000560959 LRRC75A-AS1Q8N1F1 130 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 LINC01560Q8TB33 94 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 SPACA9Q96E40 222 aaPredicted RBP17.05■□□□□ 0.32
TPM1-226ENST00000560959 HSPBAP1Q96EW2 488 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 COX4I2Q96KJ9 171 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 CAPZA3Q96KX2 299 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 DACH2Q96NX9 599 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 CSF3RQ99062 836 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 PROK2Q9HC23 129 aa17.05■□□□□ 0.32
TPM1-226ENST00000560959 ARHGAP21Q5T5U3 1957 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 ANKRD33BA6NCL7 494 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 ANKDD1BA6NHY2 528 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 LRRC3CA6NJW4 275 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 CD8B2A6NJW9 211 aa17.04■□□□□ 0.32
TPM1-226ENST00000560959 TBX6O95947 436 aaPredicted RBP17.04■□□□□ 0.32
TPM1-226ENST00000560959 C1QAP02745 245 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms