RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 OR4A15Q8NGL6 344 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ZFP28Q8NHY6 868 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 PSMA8Q8TAA3 256 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 OR5P2Q8WZ92 322 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 TANKQ92844 425 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ATOH1Q92858 354 aaPredicted RBP8.14□□□□□ -1.11
TRAF3-209ENST00000560463 MIEF2Q96C03 454 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ASB9Q96DX5 294 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 CLPTM1LQ96KA5 538 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 C10orf90Q96M02 699 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ECSITQ9BQ95 431 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 SLC39A3Q9BRY0 314 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 EDEM2Q9BV94 578 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 RAD21L1Q9H4I0 556 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ALG2Q9H553 416 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 NEUROD4Q9HD90 331 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 SLC35C2Q9NQQ7 365 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 STARD5Q9NSY2 213 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 SEMA4GQ9NTN9 838 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 IRAK4Q9NWZ3 460 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 CMTM6Q9NX76 183 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 VAPAQ9P0L0 249 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 NCDNQ9UBB6 729 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 UTS2RQ9UKP6 389 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 CES1P1Q9UKY3 287 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ATXN7L1Q9ULK2 861 aaPredicted RBP8.14□□□□□ -1.11
TRAF3-209ENST00000560463 CDC14AQ9UNH5 594 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ENTPD4Q9Y227 616 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 POMPQ9Y244 141 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 MRPS33Q9Y291 106 aaKnown RBP8.14□□□□□ -1.11
TRAF3-209ENST00000560463 ZNF780BQ9Y6R6 833 aa8.14□□□□□ -1.11
TRAF3-209ENST00000560463 EP300Q09472 2414 aaPredicted RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 PRORSD1PA6NEY8 169 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 CLIC1O00299 241 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 PGRMC2O15173 223 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 NVLO15381 856 aaKnown RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 MGRN1O60291 552 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 CPSF4O95639 269 aaKnown RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 B3GALT4O96024 378 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 RNH1P13489 461 aaKnown RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 GPX2P18283 190 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 IL1RNP18510 177 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 CSNK2A2P19784 350 aaPredicted RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 UQCRC2P22695 453 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 HTR1EP28566 365 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 PPP2R1BP30154 601 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 MPIP34949 423 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 CDKN2CP42773 168 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 GCGRP47871 477 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 ACTR3P61158 418 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 HBA1P69905 142 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 PLIN5Q00G26 463 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 E2F1Q01094 437 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 VAC14Q08AM6 782 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 ABHD18Q0P651 414 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 BIKQ13323 160 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 RIPK1Q13546 671 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 KCNAB1Q14722 419 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 GPR19Q15760 415 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 MPEG1Q2M385 716 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 AASDHQ4L235 1098 aaPredicted RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 C1orf146Q5VVC0 180 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 C18orf63Q68DL7 685 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 ZNF621Q6ZSS3 439 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 MED25Q71SY5 747 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 PRSS41Q7RTY9 318 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 DGLUCYQ7Z3D6 616 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 TMPRSS9Q7Z410 1059 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 PTRH1Q86Y79 214 aaKnown RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 SLITRK4Q8IW52 837 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 MSRB3Q8IXL7 192 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 CLECL1Q8IZS7 167 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 OR4K14Q8NGD5 310 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 OR9A4Q8NGU2 314 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 OR1L3Q8NH93 324 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 JADE3Q92613 823 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 CIDECQ96AQ7 238 aaPredicted RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 EXOSC8Q96B26 276 aaKnown RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 MOAP1Q96BY2 351 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 CCDC74BQ96LY2 380 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 BBS4Q96RK4 519 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 DPH2Q9BQC3 489 aaPredicted RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 INPP5KQ9BT40 448 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 NDC1Q9BTX1 674 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 THUMPD3Q9BV44 507 aaKnown RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 SPATA9Q9BWV2 254 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 SPRTNQ9H040 489 aaPredicted RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 RPF2Q9H7B2 306 aaKnown RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 FGF21Q9NSA1 209 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 CUTCQ9NTM9 273 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 SLC25A37Q9NYZ2 338 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 SRPK3Q9UPE1 567 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 CLCA2Q9UQC9 943 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 MRPS2Q9Y399 296 aaKnown RBP8.13□□□□□ -1.11
TRAF3-209ENST00000560463 HCN4Q9Y3Q4 1203 aa8.13□□□□□ -1.11
TRAF3-209ENST00000560463 A0A0A6YYC8 382 aaPredicted RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 TMX2-CTNND1H3BSU7 103 aa8.12□□□□□ -1.11
TRAF3-209ENST00000560463 I3L1I5 382 aaPredicted RBP8.12□□□□□ -1.11
TRAF3-209ENST00000560463 SGK494L7N484 410 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms