RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 SPIBQ01892 262 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 SIM2Q14190 667 aaPredicted RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 FGL2Q14314 439 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 MLF2Q15773 248 aaPredicted RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 NPTX1Q15818 432 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 C9orf50Q5SZB4 431 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 UBE2UQ5VVX9 321 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 MRM1Q6IN84 353 aaKnown RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 CEACAM20Q6UY09 585 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 ZNF852Q6ZMS4 543 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 C6orf120Q7Z4R8 191 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 ARHGAP22Q7Z5H3 698 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 TSEN54Q7Z6J9 526 aaKnown RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 KRT73Q86Y46 540 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 P3H2Q8IVL5 708 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 SAMD14Q8IZD0 417 aaPredicted RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 ADGRF3Q8IZF5 1079 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 LGI4Q8N135 537 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 LINC01555Q8NAE3 123 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 BPIFB6Q8NFQ5 453 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 C9orf43Q8TAL5 461 aaPredicted RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 BBS10Q8TAM1 723 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 MIPOL1Q8TD10 442 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 FAR1Q8WVX9 515 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 ZFPM2Q8WW38 1151 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 MYDGFQ969H8 173 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 MAL2Q969L2 176 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 SLC22A18Q96BI1 424 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 DHRS1Q96LJ7 313 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 KCNC2Q96PR1 638 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 TEFMQ96QE5 360 aaKnown RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 F2RL3Q96RI0 385 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 BARD1Q99728 777 aaKnown RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 BTBD2Q9BX70 525 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 ROGDIQ9GZN7 287 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 TWSG1Q9GZX9 223 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 BCL2L10Q9HD36 194 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 MRPS30Q9NP92 439 aaKnown RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 LHX9Q9NQ69 397 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 CUEDC1Q9NWM3 386 aaPredicted RBP9.22□□□□□ -0.93
RTF1-206ENST00000560447 FBXL12Q9NXK8 326 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 OR6C2Q9NZP2 312 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 ANKMY1Q9P2S6 941 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 P2RX2Q9UBL9 471 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 PCOLCE2Q9UKZ9 415 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 PLAGL1Q9UM63 463 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 NCKAP1Q9Y2A7 1128 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 MAP4K5Q9Y4K4 846 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 PLXND1Q9Y4D7 1925 aa9.22□□□□□ -0.93
RTF1-206ENST00000560447 PDE4DIPQ5VU43 2346 aa9.21□□□□□ -0.93
RTF1-206ENST00000560447 A0A1W2PQU0 124 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 LRIT2A6NDA9 550 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 CLDN24A6NM45 220 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 H7BY64 318 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 B4GAT1O43505 415 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 FAM20BO75063 409 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 DIRAS1O95057 198 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 CCNB2O95067 398 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 GADD45GO95257 159 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 APBB3O95704 486 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 PAK4O96013 591 aaPredicted RBP9.21□□□□□ -0.94
RTF1-206ENST00000560447 ADAP00813 363 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 C1QCP02747 245 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 IFI6P09912 130 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 TFPTP0C1Z6 253 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 CD247P20963 164 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 AGXTP21549 392 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 DRD1P21728 446 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 MATN1P21941 496 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 CBLP22681 906 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 SSR2P43308 183 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 SERPINB10P48595 397 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 ALDH9A1P49189 494 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 KHKP50053 298 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 GALK1P51570 392 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 ADPRHP54922 357 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 STXBP1P61764 594 aaKnown RBP9.21□□□□□ -0.94
RTF1-206ENST00000560447 MRPS21P82921 87 aaKnown RBP9.21□□□□□ -0.94
RTF1-206ENST00000560447 RELAQ04206 551 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 EMX1Q04741 257 aaPredicted RBP9.21□□□□□ -0.94
RTF1-206ENST00000560447 HYAL1Q12794 435 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 PPP1R8Q12972 351 aaKnown RBP9.21□□□□□ -0.94
RTF1-206ENST00000560447 KRT33BQ14525 404 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 SLC9A5Q14940 896 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 CEBPEQ15744 281 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 TBCEQ15813 527 aaPredicted RBP9.21□□□□□ -0.94
RTF1-206ENST00000560447 FBXO43Q4G163 708 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 COLEC12Q5KU26 742 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 ANKRD34AQ69YU3 496 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 FAM109BQ6ICB4 259 aaPredicted RBP9.21□□□□□ -0.94
RTF1-206ENST00000560447 CHST15Q7LFX5 561 aaPredicted RBP9.21□□□□□ -0.94
RTF1-206ENST00000560447 UBE3DQ7Z6J8 389 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 GALNT5Q7Z7M9 940 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 GALNT10Q86SR1 603 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 TRIM69Q86WT6 500 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 ENTHD1Q8IYW4 607 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 DNAJC5GQ8N7S2 189 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 LMNTD1Q8N9Z9 388 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 MFSD9Q8NBP5 474 aa9.21□□□□□ -0.94
RTF1-206ENST00000560447 ZNF540Q8NDQ6 660 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms