RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 PSD3Q9NYI0 1048 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 HCN3Q9P1Z3 774 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 C5AR2Q9P296 337 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 ANKMY1Q9P2S6 941 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 FBXW2Q9UKT8 454 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 PPT2Q9UMR5 302 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 ARL2BPQ9Y2Y0 163 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 LOXL2Q9Y4K0 774 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 KLK4Q9Y5K2 254 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 CORINQ9Y5Q5 1042 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 ASPMQ8IZT6 3477 aa4.94□□□□□ -1.62
SPG11-220ENST00000559933 A0A0A6YYD5 115 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ASPDHA6ND91 283 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 LRIT2A6NDA9 550 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ERICH4A6NGS2 130 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 GLOD5A6NK44 160 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 SRRM3A6NNA2 597 aaPredicted RBP4.93□□□□□ -1.62
SPG11-220ENST00000559933 FAM227AF5H4B4 570 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 SLCO1B7G3V0H7 640 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 FOXE1O00358 373 aaPredicted RBP4.93□□□□□ -1.62
SPG11-220ENST00000559933 NR5A2O00482 541 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 UBDO15205 165 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ZSCAN9O15535 394 aaPredicted RBP4.93□□□□□ -1.62
SPG11-220ENST00000559933 FOXS1O43638 330 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 JRKO75564 520 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 CLEC3AO75596 197 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 CDC123O75794 336 aaPredicted RBP4.93□□□□□ -1.62
SPG11-220ENST00000559933 SNUPNO95149 360 aaKnown RBP4.93□□□□□ -1.62
SPG11-220ENST00000559933 CBX6O95503 412 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 MT-CO3P00414 261 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 C1QCP02747 245 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 GP1BAP07359 652 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 IL3P08700 152 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ANKRD34CP0C6C1 535 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 SLC35G6P0C7Q6 338 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ZNF28P17035 718 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 LBPP18428 481 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 GPX3P22352 226 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 PIK3R1P27986 724 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 TIA1P31483 386 aaKnown RBP eCLIP4.93□□□□□ -1.62
SPG11-220ENST00000559933 AHRP35869 848 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 PIK3CBP42338 1070 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 OR1D4P47884 311 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 EFNA3P52797 238 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 DGKQP52824 942 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 MAPK10P53779 464 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 TAS2R50P59544 299 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 NAA20P61599 178 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ERVK-8P63133 956 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 PHEXP78562 749 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 HSD11B2P80365 405 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 SHC2P98077 582 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 PLIN5Q00G26 463 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ID2Q02363 134 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 DUSP2Q05923 314 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ACSM2AQ08AH3 577 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 SQSTM1Q13501 440 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 RUNX2Q13950 521 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ERV3-1Q14264 604 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ZNF124Q15973 351 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 MUM1Q2TAK8 710 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ADPRMQ3LIE5 342 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ZNF385BQ569K4 471 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 C3orf38Q5JPI3 329 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 TMEM201Q5SNT2 666 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 DEPDC1Q5TB30 811 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 CDCP2Q5VXM1 449 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ACSM2BQ68CK6 577 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 C18orf63Q68DL7 685 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 OR4C11Q6IEV9 310 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 PWWP2BQ6NUJ5 590 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 NOXRED1Q6NXP6 359 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ABHD17CQ6PCB6 329 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 SHISA6Q6ZSJ9 500 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 TTLL10Q6ZVT0 673 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 CLNKQ7Z7G1 428 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 PRSS58Q8IYP2 241 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 METTL4Q8N3J2 472 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 FITM2Q8N6M3 262 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 BMPERQ8N8U9 685 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 GBP7Q8N8V2 638 aaPredicted RBP4.93□□□□□ -1.62
SPG11-220ENST00000559933 SLC38A9Q8NBW4 561 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 DNAJB8Q8NHS0 232 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 FBXO27Q8NI29 283 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ACTRT2Q8TDY3 377 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 N4BP2L2Q92802 583 aaPredicted RBP4.93□□□□□ -1.62
SPG11-220ENST00000559933 UBE2E3Q969T4 207 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 ZUFSPQ96AP4 578 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 REPS1Q96D71 796 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 LIN37Q96GY3 246 aaPredicted RBP4.93□□□□□ -1.62
SPG11-220ENST00000559933 PPP3R2Q96LZ3 170 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 QRFPRQ96P65 431 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 CD180Q99467 661 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 SERPINI1Q99574 410 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 CDC6Q99741 560 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 MAPKAP1Q9BPZ7 522 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 MESP1Q9BRJ9 268 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 SARGQ9BW04 601 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 TRIM8Q9BZR9 551 aa4.93□□□□□ -1.62
SPG11-220ENST00000559933 EPB41L1Q9H4G0 881 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms