RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 SLC6A19Q695T7 634 aa8.62□□□□□ -1.03
IDH3A-217ENST00000559889 SHISA6Q6ZSJ9 500 aa8.62□□□□□ -1.03
IDH3A-217ENST00000559889 DHDDSQ86SQ9 333 aa8.62□□□□□ -1.03
IDH3A-217ENST00000559889 GALNT16Q8N428 558 aa8.62□□□□□ -1.03
IDH3A-217ENST00000559889 TTC29Q8NA56 475 aaPredicted RBP8.62□□□□□ -1.03
IDH3A-217ENST00000559889 CLEC1AQ8NC01 280 aa8.62□□□□□ -1.03
IDH3A-217ENST00000559889 VPS33AQ96AX1 596 aa8.62□□□□□ -1.03
IDH3A-217ENST00000559889 MTFMTQ96DP5 389 aaKnown RBP8.62□□□□□ -1.03
IDH3A-217ENST00000559889 OR2A5Q96R48 311 aa8.62□□□□□ -1.03
IDH3A-217ENST00000559889 MFRPQ9BY79 579 aa8.62□□□□□ -1.03
IDH3A-217ENST00000559889 MRPS30Q9NP92 439 aaKnown RBP8.62□□□□□ -1.03
IDH3A-217ENST00000559889 SDR39U1Q9NRG7 319 aaPredicted RBP8.62□□□□□ -1.03
IDH3A-217ENST00000559889 LUZP4Q9P127 313 aa8.62□□□□□ -1.03
IDH3A-217ENST00000559889 TAC3Q9UHF0 121 aa8.62□□□□□ -1.03
IDH3A-217ENST00000559889 MAP4K5Q9Y4K4 846 aa8.62□□□□□ -1.03
IDH3A-217ENST00000559889 USP9YO00507 2555 aaPredicted RBP8.62□□□□□ -1.03
IDH3A-217ENST00000559889 CCDC88CQ9P219 2028 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 PEX12O00623 359 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 DPM1O60762 260 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 STK16O75716 305 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 EIF2S1P05198 315 aaKnown RBP8.61□□□□□ -1.03
IDH3A-217ENST00000559889 CAPN3P20807 821 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 IMPA1P29218 277 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 HSD17B2P37059 387 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 UQCRFS1P47985 274 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 ATP4BP51164 291 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 SLC7A2P52569 658 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 KCNK10P57789 538 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 UFM1P61960 85 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 SNRPNP63162 240 aaKnown RBP8.61□□□□□ -1.03
IDH3A-217ENST00000559889 CAPRIN1Q14444 709 aaKnown RBP8.61□□□□□ -1.03
IDH3A-217ENST00000559889 ABRAXAS2Q15018 415 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 TRIP10Q15642 601 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 GSTA3Q16772 222 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 LPCAT4Q643R3 524 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 KIRREL2Q6UWL6 708 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 IZUMO2Q6UXV1 221 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 RETREG3Q86VR2 466 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 CPT1CQ8TCG5 803 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 PYCR2Q96C36 320 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 TEX37Q96LM6 180 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 TMEM79Q9BSE2 394 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 TRIM54Q9BYV2 358 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 SOX17Q9H6I2 414 aaPredicted RBP8.61□□□□□ -1.03
IDH3A-217ENST00000559889 ZBTB20Q9HC78 741 aaPredicted RBP8.61□□□□□ -1.03
IDH3A-217ENST00000559889 PRM3Q9NNZ6 103 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 C5AR2Q9P296 337 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 ANKMY1Q9P2S6 941 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 BCAP29Q9UHQ4 241 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 PDE10AQ9Y233 779 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 GPR45Q9Y5Y3 372 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 PRORSD1PA6NEY8 169 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 K7EPI3 171 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 SLC22A3O75751 556 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 IGHEP01854 428 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 PIM1P11309 404 aaPredicted RBP8.61□□□□□ -1.03
IDH3A-217ENST00000559889 ATP6V1C1P21283 382 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 GCKP35557 465 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 SOX11P35716 441 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 EMP3P54852 163 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 ERVK-8P63133 956 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 RELAQ04206 551 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 TRAF3Q13114 568 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 CPSF6Q16630 551 aaKnown RBP eCLIP8.61□□□□□ -1.03
IDH3A-217ENST00000559889 HKDC1Q2TB90 917 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 XKR7Q5GH72 579 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 IGFL3Q6UXB1 125 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 CYP2R1Q6VVX0 501 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 RNF111Q6ZNA4 994 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 Q6ZSR9 355 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 SPATA19Q7Z5L4 167 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 PNPLA2Q96AD5 504 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 ZNF184Q99676 751 aaPredicted RBP8.61□□□□□ -1.03
IDH3A-217ENST00000559889 TRIM8Q9BZR9 551 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 ZNF304Q9HCX3 659 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 FARSBQ9NSD9 589 aaKnown RBP8.61□□□□□ -1.03
IDH3A-217ENST00000559889 FBXL4Q9UKA2 621 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 RUVBL1Q9Y265 456 aaKnown RBP8.61□□□□□ -1.03
IDH3A-217ENST00000559889 RNF11Q9Y3C5 154 aa8.61□□□□□ -1.03
IDH3A-217ENST00000559889 IGLV3-12A0A075B6K2 115 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 EIF3FO00303 357 aaPredicted RBP8.6□□□□□ -1.03
IDH3A-217ENST00000559889 ALOX12BO75342 701 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 ULK1O75385 1050 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 CLNS1AP54105 237 aaKnown RBP8.6□□□□□ -1.03
IDH3A-217ENST00000559889 KLC1Q07866 573 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 TSTA3Q13630 321 aaPredicted RBP8.6□□□□□ -1.03
IDH3A-217ENST00000559889 TRIM25Q14258 630 aaKnown RBP8.6□□□□□ -1.03
IDH3A-217ENST00000559889 INPP5JQ15735 1006 aaPredicted RBP8.6□□□□□ -1.03
IDH3A-217ENST00000559889 IMPG1Q17R60 797 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 AP5B1Q2VPB7 878 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 PLEKHN1Q494U1 663 aaPredicted RBP8.6□□□□□ -1.03
IDH3A-217ENST00000559889 OGFOD2Q6N063 350 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 PRMT9Q6P2P2 845 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 KBTBD2Q8IY47 623 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 DNAJB14Q8TBM8 379 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 STT3BQ8TCJ2 826 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 SPDL1Q96EA4 605 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 ANKRD27Q96NW4 1050 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 ATG10Q9H0Y0 220 aa8.6□□□□□ -1.03
IDH3A-217ENST00000559889 ACTR8Q9H981 624 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms