RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 CNR2P34972 360 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 VASPP50552 380 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-216ENST00000559819 TP53BP2Q13625 1128 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 SEC23BQ15437 767 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 C10orf62Q5T681 223 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-216ENST00000559819 MLIPQ5VWP3 458 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 SAXO2Q658L1 398 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 REEP3Q6NUK4 255 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 UNC5DQ6UXZ4 953 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 SLC22A16Q86VW1 577 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 FAM20CQ8IXL6 584 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 TAGAPQ8N103 731 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 KRT78Q8N1N4 520 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 DEPDC4Q8N2C3 294 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 CLIP4Q8N3C7 705 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 CXorf40AQ8TE69 158 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 FCGR1BQ92637 280 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 UBE2E3Q969T4 207 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 CENPOQ9BU64 300 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 LHX9Q9NQ69 397 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 ABCB10Q9NRK6 738 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 TEX10Q9NXF1 929 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-216ENST00000559819 SLC27A6Q9Y2P4 619 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 C5orf42Q9H799 3197 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 C5orf58C9J3I9 102 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 PDPK1O15530 556 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 ZSCAN9O15535 394 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-216ENST00000559819 LATO43561 262 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 TMPRSS11DO60235 418 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 PRKRAO75569 313 aaKnown RBP9.55□□□□□ -0.88
LRRC28-216ENST00000559819 IFNA14P01570 189 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 FGBP02675 491 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 SERPIND1P05546 499 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 RHCEP18577 417 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 P2RY2P41231 377 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 IL12RB1P42701 662 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 DPTQ07507 201 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 CBX3Q13185 183 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 ELOAQ14241 798 aaKnown RBP9.55□□□□□ -0.88
LRRC28-216ENST00000559819 ELAVL3Q14576 367 aaKnown RBP9.55□□□□□ -0.88
LRRC28-216ENST00000559819 SPDYE7PQ495Y7 208 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 DEPDC1Q5TB30 811 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 IKBIPQ70UQ0 350 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 ERN2Q76MJ5 926 aaKnown RBP9.55□□□□□ -0.88
LRRC28-216ENST00000559819 SZRD1Q7Z422 152 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 AMZ2Q86W34 360 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 LACC1Q8IV20 430 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 DCUN1D3Q8IWE4 304 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 Q96MT0 163 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 COL21A1Q96P44 957 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 IL4I1Q96RQ9 567 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 MS4A8Q9BY19 250 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 SERHL2Q9H4I8 314 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 DYRK4Q9NR20 520 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 SIRT3Q9NTG7 399 aaPredicted RBP9.55□□□□□ -0.88
LRRC28-216ENST00000559819 GPR34Q9UPC5 381 aa9.55□□□□□ -0.88
LRRC28-216ENST00000559819 VEGFDO43915 354 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 WASP42768 502 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 CRISP1P54107 249 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 RPS3AP61247 264 aaKnown RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 IRF3Q14653 427 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 ZNF404Q494X3 552 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 TMEM52BQ4KMG9 183 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 FAM78AQ5JUQ0 283 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 ZNF770Q6IQ21 691 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 TMC5Q6UXY8 1006 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 DEF8Q6ZN54 512 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 PTCHD4Q6ZW05 846 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 C6orf120Q7Z4R8 191 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 BCDIN3DQ7Z5W3 292 aaKnown RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 CADM3Q8N126 398 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 DENND6BQ8NEG7 585 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 APOBEC4Q8WW27 367 aaKnown RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 NEURL3Q96EH8 262 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 PDXPQ96GD0 296 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 ZNF514Q96K75 400 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 MACROD1Q9BQ69 325 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 MIR1-1HGQ9H1L0 117 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 XKR8Q9H6D3 395 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 DEC1Q9P2X7 70 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 A0A1W2PPV9 198 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 PRAMEF27A3QJZ7 478 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 IGLON5A6NGN9 336 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 ZAR1LA6NP61 321 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 ANHXE9PGG2 379 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 LCMT2O60294 686 aaKnown RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 DNTTP04053 509 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 RPLP0P05388 317 aaKnown RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 HNRNPA1P09651 372 aaKnown RBP eCLIP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 MYOGP15173 224 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 UGT2B10P36537 528 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 EIF2DP41214 584 aaKnown RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 HMGA2P52926 109 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 SLC13A2Q13183 592 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 MED22Q15528 200 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 TSTQ16762 297 aaKnown RBP9.54□□□□□ -0.88
LRRC28-216ENST00000559819 UAP1L1Q3KQV9 507 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 UBE3DQ7Z6J8 389 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 COMTD1Q86VU5 262 aa9.54□□□□□ -0.88
LRRC28-216ENST00000559819 LSRQ86X29 649 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms