RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ZNF490Q9ULM2 529 aaPredicted RBP12.12□□□□□ -0.47
TPM1-220ENST00000559556 C17orf105B2RV13 164 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 G3V3Y1 287 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 CLGNO14967 610 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 ZNF354AO60765 605 aaPredicted RBP12.11□□□□□ -0.47
TPM1-220ENST00000559556 WDR1O75083 606 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 LDB3O75112 727 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 SCELO95171 688 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 CCL3P10147 92 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 TCP1P17987 556 aaKnown RBP12.11□□□□□ -0.47
TPM1-220ENST00000559556 DNAJA1P31689 397 aaKnown RBP12.11□□□□□ -0.47
TPM1-220ENST00000559556 ART1P52961 327 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 POU4F1Q01851 419 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 STX4Q12846 297 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 CBLBQ13191 982 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 DOC2AQ14183 400 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 E2F2Q14209 437 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 ZNF750Q32MQ0 723 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 OPN5Q6U736 354 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 ZNF793Q6ZN11 406 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 CLYBLQ8N0X4 340 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 PDPRQ8NCN5 879 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 FBXO36Q8NEA4 188 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 F2RL3Q96RI0 385 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 EFCAB11Q9BUY7 163 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 MS4A8Q9BY19 250 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 OR8D2Q9GZM6 311 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 ROGDIQ9GZN7 287 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 ATG4BQ9Y4P1 393 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 JMJD1CQ15652 2540 aa12.11□□□□□ -0.47
TPM1-220ENST00000559556 A0A0G2JNJ9 132 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 MYOCOSA0A1B0GUC4 107 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 STK16O75716 305 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 GLI4P10075 376 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 ATP5A1P25705 553 aaKnown RBP12.1□□□□□ -0.47
TPM1-220ENST00000559556 ZFP36L2P47974 494 aaKnown RBP12.1□□□□□ -0.47
TPM1-220ENST00000559556 HSPA7P48741 367 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 DNASE1L1P49184 302 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 IGLV3-21P80748 117 aaPredicted RBP12.1□□□□□ -0.47
TPM1-220ENST00000559556 DR1Q01658 176 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 PDIA2Q13087 525 aaKnown RBP12.1□□□□□ -0.47
TPM1-220ENST00000559556 MYBPHQ13203 477 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 LAPTM5Q13571 262 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 TBCCQ15814 346 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 PDK4Q16654 411 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 MPEG1Q2M385 716 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 FBXO48Q5FWF7 155 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 SULT1C3Q6IMI6 304 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 ZNF585AQ6P3V2 769 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 ADGRD1Q6QNK2 874 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 FAM47EQ6ZV65 393 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 UBE3DQ7Z6J8 389 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 GPSM1Q86YR5 675 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 SRFBP1Q8NEF9 429 aaKnown RBP12.1□□□□□ -0.47
TPM1-220ENST00000559556 MYRIPQ8NFW9 859 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 OR5L2Q8NGL0 311 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 OR10Q1Q8NGQ4 319 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 ZNF721Q8TF20 911 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 SREK1Q8WXA9 508 aaKnown RBP12.1□□□□□ -0.47
TPM1-220ENST00000559556 RUNDC3BQ96NL0 473 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 MAPKAP1Q9BPZ7 522 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 TBCDQ9BTW9 1192 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 SH2D2AQ9NP31 389 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 TUBA8Q9NY65 449 aaPredicted RBP12.1□□□□□ -0.47
TPM1-220ENST00000559556 COPS7AQ9UBW8 275 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 Q9UFV3 132 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 L3MBTL1Q9Y468 752 aa12.1□□□□□ -0.47
TPM1-220ENST00000559556 HCN1O60741 890 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 ZWINTO95229 277 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 ETHE1O95571 254 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 IGKV3-11P04433 115 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 P04436 131 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 CELA3AP09093 270 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 CCDC166P0CW27 439 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 CD1DP15813 335 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 EPORP19235 508 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 ENDOUP21128 410 aaKnown RBP12.09□□□□□ -0.47
TPM1-220ENST00000559556 HIST1H1TP22492 207 aaPredicted RBP12.09□□□□□ -0.47
TPM1-220ENST00000559556 CASP2P42575 452 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 MAN2A2P49641 1150 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 SLC12A2P55011 1212 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 DLX5P56178 289 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 OR4D1Q15615 310 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 SLC25A35Q3KQZ1 300 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 PAGE2BQ5JRK9 111 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 C1orf185Q5T7R7 199 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 ACOT4Q8N9L9 421 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 SNX31Q8N9S9 440 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 C7orf57Q8NEG2 295 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 NUBPLQ8TB37 319 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 ZNF473Q8WTR7 871 aaKnown RBP12.09□□□□□ -0.47
TPM1-220ENST00000559556 ANKRD9Q96BM1 317 aaPredicted RBP12.09□□□□□ -0.47
TPM1-220ENST00000559556 SARAFQ96BY9 339 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 TSPAN17Q96FV3 270 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 GPR22Q99680 433 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 CXXC4Q9H2H0 198 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 ZNF703Q9H7S9 590 aaPredicted RBP12.09□□□□□ -0.47
TPM1-220ENST00000559556 CAB39LQ9H9S4 337 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 SMYD2Q9NRG4 433 aa12.09□□□□□ -0.47
TPM1-220ENST00000559556 PTBP2Q9UKA9 531 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms