RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 THAP3Q8WTV1 239 aaPredicted RBP11.74□□□□□ -0.53
LRRC28-214ENST00000559433 UBLCP1Q8WVY7 318 aaPredicted RBP11.74□□□□□ -0.53
LRRC28-214ENST00000559433 NR4A3Q92570 626 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 DAZLQ92904 295 aaKnown RBP11.74□□□□□ -0.53
LRRC28-214ENST00000559433 TMEM125Q96AQ2 219 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 SCMH1Q96GD3 660 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 FRG2BQ96QU4 278 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 NTMT1Q9BV86 223 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 HES7Q9BYE0 225 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 ZBTB26Q9HCK0 441 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 MS4A12Q9NXJ0 267 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 TMEM216Q9P0N5 145 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 LRFN1Q9P244 771 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 SEC14L3Q9UDX4 400 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 PLEKHB1Q9UF11 243 aaPredicted RBP11.74□□□□□ -0.53
LRRC28-214ENST00000559433 TBK1Q9UHD2 729 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 PHF11Q9UIL8 331 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 PPIEQ9UNP9 301 aaKnown RBP11.74□□□□□ -0.53
LRRC28-214ENST00000559433 PCDHGB6Q9Y5F9 930 aa11.74□□□□□ -0.53
LRRC28-214ENST00000559433 SPTBN1Q01082 2364 aaKnown RBP11.74□□□□□ -0.53
LRRC28-214ENST00000559433 A0A1B0GUH1 482 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 A1L4Q6 167 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 C17orf105B2RV13 164 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 EEDO75530 441 aaKnown RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 SLC25A12O75746 678 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 NEURL1O76050 574 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 OTCP00480 354 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 TSPAN8P19075 237 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 TLX1P31314 330 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 BSGP35613 385 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 CYB561P49447 251 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 GPR143P51810 404 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 TDGF1P3P51864 188 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 ARFIP1P53367 373 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 HNRNPH2P55795 449 aaKnown RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 SRSF11Q05519 484 aaKnown RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 POLEQ07864 2286 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 IFT88Q13099 833 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 MAPKAPK3Q16644 382 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 GGTA1PQ4G0N0 100 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 SGO1Q5FBB7 561 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 C10orf62Q5T681 223 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 ZNF468Q5VIY5 522 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 SLC25A25Q6KCM7 469 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 CYP20A1Q6UW02 462 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 MILR1Q7Z6M3 343 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 NUDT13Q86X67 352 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 TMEM151AQ8N4L1 468 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 MORN4Q8NDC4 146 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 OR4F6Q8NGB9 312 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 OR14A16Q8NHC5 309 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 ACMSDQ8TDX5 336 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 PTPMT1Q8WUK0 201 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 ANKRD9Q96BM1 317 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 SERPINI1Q99574 410 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 ZNF717Q9BY31 904 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 OR8D2Q9GZM6 311 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 ELOVL6Q9H5J4 265 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 RPF2Q9H7B2 306 aaKnown RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 LYARQ9NX58 379 aaKnown RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 PSD3Q9NYI0 1048 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 VTI1BQ9UEU0 232 aa11.73□□□□□ -0.53
LRRC28-214ENST00000559433 ERRFI1Q9UJM3 462 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 ZNF223Q9UK11 482 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-214ENST00000559433 A0A0A6YYD5 115 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 DYRK3O43781 588 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 TMPRSS11DO60235 418 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 FGF17O60258 216 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 PRKNO60260 465 aaPredicted RBP11.72□□□□□ -0.53
LRRC28-214ENST00000559433 PRKRAO75569 313 aaKnown RBP11.72□□□□□ -0.53
LRRC28-214ENST00000559433 ITGA10O75578 1167 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 ZFAND5O76080 213 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 SEMA3DO95025 777 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 UNC5CO95185 931 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 SHBGP04278 402 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 SP1P08047 785 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 FAM58BPP0C7Q3 252 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 RNF224P0DH78 156 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 NR2F6P10588 404 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 COX7A2P14406 83 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 MST1P26927 711 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 TNFRSF8P28908 595 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 TRHRP34981 398 aaPredicted RBP11.72□□□□□ -0.53
LRRC28-214ENST00000559433 BUD31P41223 144 aaPredicted RBP11.72□□□□□ -0.53
LRRC28-214ENST00000559433 HLCSP50747 726 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 CDH13P55290 713 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 KCNK10P57789 538 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 HERVK_113P63132 956 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 ALDH6A1Q02252 535 aaKnown RBP11.72□□□□□ -0.53
LRRC28-214ENST00000559433 FOLH1Q04609 750 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.72□□□□□ -0.53
LRRC28-214ENST00000559433 C18orf63Q68DL7 685 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 LETMD1Q6P1Q0 360 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 HSDL2Q6YN16 418 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 GALNTL5Q7Z4T8 443 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 OR4N5Q8IXE1 308 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 CNPY4Q8N129 248 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 ARMC10Q8N2F6 343 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 TMEM156Q8N614 296 aa11.72□□□□□ -0.53
LRRC28-214ENST00000559433 SLC2A12Q8TD20 617 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms