RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 CCSER1Q9C0I3 900 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 FAM49AQ9H0Q0 323 aaPredicted RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 ACTR8Q9H981 624 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 SLC25A19Q9HC21 320 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 S100A14Q9HCY8 104 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 SPHK2Q9NRA0 654 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 PLCXD1Q9NUJ7 323 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 MIS18AQ9NYP9 233 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 PLEK2Q9NYT0 353 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 TAS2R3Q9NYW6 316 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 CACNG5Q9UF02 275 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 HOOK1Q9UJC3 728 aaKnown RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 MRTO4Q9UKD2 239 aaKnown RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 BLOC1S6Q9UL45 172 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 CCPG1Q9ULG6 757 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 ICAM5Q9UMF0 924 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 AURKCQ9UQB9 309 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 PPP1R3CQ9UQK1 317 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 ERVK-19Q9WJR5 959 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 PLEKHA6Q9Y2H5 1048 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 MRPS28Q9Y2Q9 187 aaKnown RBP1.41□□□□□ -2.18
USP3-209ENST00000558925 KLHDC2Q9Y2U9 406 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 GON4LQ3T8J9 2241 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 DISP3Q9P2K9 1392 aa1.41□□□□□ -2.18
USP3-209ENST00000558925 KIF7Q2M1P5 1343 aa1.4□□□□□ -2.18
USP3-209ENST00000558925 FAM205AQ6ZU69 1335 aa1.4□□□□□ -2.18
USP3-209ENST00000558925 hCG_38984A0A1B0GV85 526 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 OR5H15A6NDH6 313 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 C15orf61A6NNL5 157 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 HHLA1C9JL84 531 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 EEF2KO00418 725 aaKnown RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 RASGRF2O14827 1237 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 SURF4O15260 269 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 ZNF749O43361 778 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 ZNF821O75541 412 aaPredicted RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 ANXA9O76027 345 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 TRIM16O95361 564 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 SYNGR4O95473 234 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 EML2O95834 649 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 IGHG3P01860 377 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 VTNP04004 478 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 CT45A8P0DMV1 189 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 CT45A9P0DMV2 189 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 GNSP15586 552 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 ZNF18P17022 549 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 DESP17661 470 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 PRDX2P32119 198 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 SLC6A12P48065 614 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 PEX3P56589 373 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 RPL27P61353 136 aaKnown RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 TRA2BP62995 288 aaKnown RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 CCZ1BP86790 482 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 CCZ1P86791 482 aaPredicted RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 PMP22Q01453 160 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 POU3F1Q03052 451 aaPredicted RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 GABPAQ06546 454 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 MFGE8Q08431 387 aaPredicted RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 DRP2Q13474 957 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 ITPK1Q13572 414 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 TMEM187Q14656 261 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 MEF2DQ14814 521 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 CARTPTQ16568 116 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 KRTAP24-1Q3LI83 254 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 ZNF528Q3MIS6 628 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 ZNF876PQ49A33 203 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 AGKQ53H12 422 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 FASTKD1Q53R41 847 aaKnown RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 CT45A2Q5DJT8 189 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 HERC4Q5GLZ8 1057 aaPredicted RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 GFI1BQ5VTD9 330 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 RAET1GQ6H3X3 334 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 RTL6Q6ICC9 239 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 IRGCQ6NXR0 463 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 CDC42EP5Q6NZY7 148 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 ARHGAP11AQ6P4F7 1023 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 ZNF730Q6ZMV8 503 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 Q6ZRG5 221 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 RBM43Q6ZSC3 357 aaKnown RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 RFPL4BQ6ZWI9 263 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 CYP4V2Q6ZWL3 525 aaPredicted RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 CUZD1Q86UP6 607 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 ITIH5Q86UX2 942 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 SLC22A16Q86VW1 577 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 AMZ2Q86W34 360 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 KCNMB4Q86W47 210 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 HSCBQ8IWL3 235 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 SLC22A15Q8IZD6 547 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 ZNF444Q8N0Y2 327 aaPredicted RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 CNBD1Q8NA66 436 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 AQP11Q8NBQ7 271 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 MINDY2Q8NBR6 621 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 LEMD2Q8NC56 503 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 ANKRD20A12PQ8NF67 263 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 IPMKQ8NFU5 416 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 OR9Q2Q8NGE9 314 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 OR6M1Q8NGM8 313 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 DQX1Q8TE96 717 aaKnown RBP1.4□□□□□ -2.19
USP3-209ENST00000558925 TMEM190Q8WZ59 177 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 PHYHIPQ92561 330 aa1.4□□□□□ -2.19
USP3-209ENST00000558925 ARHGAP45Q92619 1136 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms