RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 SCYL1Q96KG9 808 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 LURAP1Q96LR2 239 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 GPR78Q96P69 363 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 KCNC2Q96PR1 638 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 CNOT10Q9H9A5 744 aaKnown RBP12.56□□□□□ -0.4
VPS18-203ENST00000558855 COPS7BQ9H9Q2 264 aaPredicted RBP12.56□□□□□ -0.4
VPS18-203ENST00000558855 LYRM4Q9HD34 91 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 SEMA4BQ9NPR2 832 aaPredicted RBP12.56□□□□□ -0.4
VPS18-203ENST00000558855 ZNF358Q9NW07 568 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 TXNDC16Q9P2K2 825 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 VTI1BQ9UEU0 232 aa12.56□□□□□ -0.4
VPS18-203ENST00000558855 NINQ8N4C6 2090 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 C17orf105B2RV13 164 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 E9PLN8 166 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 K7EPI3 171 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 CLDN4O14493 209 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 EEDO75530 441 aaKnown RBP12.55□□□□□ -0.4
VPS18-203ENST00000558855 SIX3O95343 332 aaPredicted RBP12.55□□□□□ -0.4
VPS18-203ENST00000558855 NADKO95544 446 aaPredicted RBP12.55□□□□□ -0.4
VPS18-203ENST00000558855 CLPSP04118 112 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 C2P06681 752 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 GSTA2P09210 222 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 LTA4HP09960 611 aaKnown RBP12.55□□□□□ -0.4
VPS18-203ENST00000558855 CCL3P10147 92 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 COX6B1P14854 86 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 PTGS2P35354 604 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 PIK3CGP48736 1102 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 CASP6P55212 293 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 RNF4P78317 190 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 IGLV3-21P80748 117 aaPredicted RBP12.55□□□□□ -0.4
VPS18-203ENST00000558855 PCDH1Q08174 1060 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 KHDRBS2Q5VWX1 349 aaKnown RBP12.55□□□□□ -0.4
VPS18-203ENST00000558855 GRHL2Q6ISB3 625 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 MED27Q6P2C8 311 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 RAPH1Q70E73 1250 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 ZNF572Q7Z3I7 529 aaPredicted RBP12.55□□□□□ -0.4
VPS18-203ENST00000558855 MAATS1Q7Z4T9 603 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 TMEM132CQ8N3T6 1108 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 TEX9Q8N6V9 391 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 HUS1BQ8NHY5 278 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 PHF10Q8WUB8 498 aaKnown RBP12.55□□□□□ -0.4
VPS18-203ENST00000558855 PPWD1Q96BP3 646 aaKnown RBP12.55□□□□□ -0.4
VPS18-203ENST00000558855 MTERF1Q99551 399 aaKnown RBP12.55□□□□□ -0.4
VPS18-203ENST00000558855 VKORC1Q9BQB6 163 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 CAPS2Q9BXY5 557 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 PHACTR1Q9C0D0 580 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 DMRT3Q9NQL9 472 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 NPDC1Q9NQX5 325 aaPredicted RBP12.55□□□□□ -0.4
VPS18-203ENST00000558855 SNX15Q9NRS6 342 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 OPTCQ9UBM4 332 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 PPT2Q9UMR5 302 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 YARS2Q9Y2Z4 477 aaKnown RBP12.55□□□□□ -0.4
VPS18-203ENST00000558855 ATG4BQ9Y4P1 393 aa12.55□□□□□ -0.4
VPS18-203ENST00000558855 A0A1B0GTL3 188 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 ENO4A6NNW6 628 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 A8MVJ9 347 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 CDK2AP1O14519 115 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 TMPRSS11DO60235 418 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 GLSO94925 669 aaPredicted RBP12.54□□□□□ -0.4
VPS18-203ENST00000558855 LRATO95237 230 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 ALDOAP04075 364 aaKnown RBP12.54□□□□□ -0.4
VPS18-203ENST00000558855 S100BP04271 92 aaPredicted RBP12.54□□□□□ -0.4
VPS18-203ENST00000558855 IGKV3-11P04433 115 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 AGAP20933 346 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 SSR2P43308 183 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 DNASE1L1P49184 302 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 RPS13P62277 151 aaKnown RBP12.54□□□□□ -0.4
VPS18-203ENST00000558855 FOXO1Q12778 655 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 LAPTM5Q13571 262 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 NAA30Q147X3 362 aaPredicted RBP12.54□□□□□ -0.4
VPS18-203ENST00000558855 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 DEPDC1Q5TB30 811 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 MROH9Q5TGP6 573 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 HSDL2Q6YN16 418 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 CEP128Q6ZU80 1094 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 POGLUT1Q8NBL1 392 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 MORN4Q8NDC4 146 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 OR14A16Q8NHC5 309 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 STAG3L4Q8TBR4 150 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 ASB15Q8WXK1 588 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 SDCCAG3Q96C92 435 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 LRRC1Q9BTT6 524 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 TBCDQ9BTW9 1192 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 TTTY12Q9BZ98 90 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 ZDHHC11Q9H8X9 412 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 HPF1Q9NWY4 346 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 TUBA8Q9NY65 449 aaPredicted RBP12.54□□□□□ -0.4
VPS18-203ENST00000558855 NINJ2Q9NZG7 142 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 ERVK-11Q9UQG0 969 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 MRPS33Q9Y291 106 aaKnown RBP12.54□□□□□ -0.4
VPS18-203ENST00000558855 CLCA3PQ9Y6N3 262 aa12.54□□□□□ -0.4
VPS18-203ENST00000558855 INTS1Q8N201 2190 aaKnown RBP12.53□□□□□ -0.4
VPS18-203ENST00000558855 A0A088AWK7 358 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 NKX2-6A6NCS4 301 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 GLOD5A6NK44 160 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 KLRC4-KLRK1H3BQV0 150 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 PRRG2O14669 202 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 KLK8O60259 260 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 MLYCDO95822 493 aa12.53□□□□□ -0.4
VPS18-203ENST00000558855 TUBB4AP04350 444 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms