RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 EML6Q6ZMW3 1958 aa11.66□□□□□ -0.54
SMAD3-208ENST00000558827 HRKO00198 91 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 FCHO1O14526 889 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 TMPRSS11DO60235 418 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 ITGA10O75578 1167 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 OR2J2O76002 312 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 ZFAND5O76080 213 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 CLDN9O95484 217 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 SNRPAP09012 282 aaKnown RBP11.65□□□□□ -0.54
SMAD3-208ENST00000558827 SBK3P0C264 359 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 HLCSP50747 726 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 GPR143P51810 404 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 NR0B1P51843 470 aaKnown RBP11.65□□□□□ -0.54
SMAD3-208ENST00000558827 E2F2Q14209 437 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 RCN2Q14257 317 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 TTC19Q6DKK2 380 aaPredicted RBP11.65□□□□□ -0.54
SMAD3-208ENST00000558827 IL20RBQ6UXL0 311 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 MDGA2Q7Z553 956 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 CCDC91Q7Z6B0 441 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 GPR180Q86V85 440 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 TMEM132CQ8N3T6 1108 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 TMEM178AQ8NBL3 297 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 DNAJB8Q8NHS0 232 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 ADAMTS18Q8TE60 1221 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 ROGDIQ9GZN7 287 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 ZBTB26Q9HCK0 441 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 TBK1Q9UHD2 729 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 PCTPQ9UKL6 214 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 ERVK-11Q9UQG0 969 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 PCDHGA11Q9Y5H2 935 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 TNPO3Q9Y5L0 923 aaKnown RBP11.65□□□□□ -0.54
SMAD3-208ENST00000558827 SPACA6W5XKT8 324 aa11.65□□□□□ -0.54
SMAD3-208ENST00000558827 A0A1W2PR48 441 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 A0A1W2PS29 197 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 WIPF3A6NGB9 483 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 TMEM200CA6NKL6 621 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 CCL21O00585 134 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 RIPK2O43353 540 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 PTX3P26022 381 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-208ENST00000558827 BSGP35613 385 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 MEOX1P50221 254 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 FOLH1Q04609 750 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 PCDH1Q08174 1060 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 ELAVL1Q15717 326 aaKnown RBP11.64□□□□□ -0.55
SMAD3-208ENST00000558827 INAQ16352 499 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 C3AR1Q16581 482 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 ZNF750Q32MQ0 723 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 C3P1Q6ZMU1 363 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 NCCRP1Q6ZVX7 275 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-208ENST00000558827 MAMDC2Q7Z304 686 aaPredicted RBP11.64□□□□□ -0.55
SMAD3-208ENST00000558827 MILR1Q7Z6M3 343 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 SULF2Q8IWU5 870 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 CYP4Z2PQ8N1L4 340 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 HORMAD2Q8N7B1 307 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 L3MBTL4Q8NA19 623 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 OR4F6Q8NGB9 312 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 WDR20Q8TBZ3 569 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 SLC2A12Q8TD20 617 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 TRPC4APQ8TEL6 797 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 ISL2Q96A47 359 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 TMEM125Q96AQ2 219 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 FRMD6Q96NE9 622 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 HBEGFQ99075 208 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 MRPL57Q9BQC6 102 aaKnown RBP11.64□□□□□ -0.55
SMAD3-208ENST00000558827 CENPKQ9BS16 269 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 RPF2Q9H7B2 306 aaKnown RBP11.64□□□□□ -0.55
SMAD3-208ENST00000558827 FARSBQ9NSD9 589 aaKnown RBP11.64□□□□□ -0.55
SMAD3-208ENST00000558827 TMEM216Q9P0N5 145 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 VTI1BQ9UEU0 232 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 TINAGQ9UJW2 476 aa11.64□□□□□ -0.55
SMAD3-208ENST00000558827 A0A0G2JMM0 328 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 A0A1W2PPB8 328 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 A0A1W2PRS3 328 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 PINLYPA6NC86 204 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 SMIM23A6NLE4 172 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 A8MT66 165 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 KIR3DP1A8MWS1 328 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 H0YIV9 168 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 PGRMC2O15173 223 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 PEX1O43933 1283 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 NME2P1O60361 137 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 ZNF354AO60765 605 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-208ENST00000558827 PDE9AO76083 593 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 OR6B1O95007 311 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 TUBB4AP04350 444 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 KLK1P06870 262 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 STSP08842 583 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 FAM58BPP0C7Q3 252 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 NME2P22392 152 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 SERPINB1P30740 379 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 PTGER1P34995 402 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 SOX3P41225 446 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 PIK3CBP42338 1070 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 SSR4P51571 173 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 HK2P52789 917 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 PHEXP78562 749 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 TRAF3Q13114 568 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 SLC29A2Q14542 456 aa11.63□□□□□ -0.55
SMAD3-208ENST00000558827 ZNF267Q14586 743 aaPredicted RBP11.63□□□□□ -0.55
SMAD3-208ENST00000558827 TSNAXIP1Q2TAA8 658 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms