RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 CMTM6Q9NX76 183 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 NSMCE4AQ9NXX6 385 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 B3GNT2Q9NY97 397 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ADA2Q9NZK5 511 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 MSRB1Q9NZV6 116 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 OPTCQ9UBM4 332 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ZNF229Q9UJW7 825 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 TRPC5Q9UL62 973 aaPredicted RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 MKLN1Q9UL63 735 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 SNX7Q9UNH6 387 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 PDE10AQ9Y233 779 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 NOSIPQ9Y314 301 aaKnown RBP3.1□□□□□ -1.91
HERC1-203ENST00000558532 NDUFAF1Q9Y375 327 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 DGKBQ9Y6T7 804 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 COL1A2P08123 1366 aa3.1□□□□□ -1.91
HERC1-203ENST00000558532 ZSWIM8A7E2V4 1837 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 ZFC3H1O60293 1989 aaKnown RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 SMCHD1A6NHR9 2005 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 A0A075B6Q4 140 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 RNF103-CHMP3A0A140T963 221 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 A0A1W2PPC1 479 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 TYW5A2RUC4 315 aaKnown RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 OR2A25A4D2G3 310 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 SNTNA6NMZ2 147 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 SLC38A8A6NNN8 435 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 PDZK1P1A8MUH7 402 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 LOC110117498-PIK3R3F6TDL0 507 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 F8W810 466 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 H3BQ06 376 aaPredicted RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 M0R3G1 203 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 AP3B1O00203 1094 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 PDHXO00330 501 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 EEF2KO00418 725 aaKnown RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 SYT5O00445 386 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 SLC16A4O15374 487 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 B4GAT1O43505 415 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 TMCC2O75069 709 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 ZNF780AO75290 641 aaPredicted RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 USP12O75317 370 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 EEDO75530 441 aaKnown RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 STBD1O95210 358 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 WISP3O95389 354 aaPredicted RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 NTN1O95631 604 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 NPPAP01160 153 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 SLC4A1P02730 911 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 ALPPP05187 535 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 POLBP06746 335 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 APRTP07741 180 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 IL7P13232 177 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 IL7RP16871 459 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 CAPN3P20807 821 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 EFNA1P20827 205 aaPredicted RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 CFL1P23528 166 aaKnown RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 CHMP24386 653 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 HRH2P25021 359 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 ERP29P30040 261 aaKnown RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 YWHABP31946 246 aaKnown RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 SLC26A3P40879 764 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 ZFP36L2P47974 494 aaKnown RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 TUFMP49411 452 aaKnown RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 GLUD2P49448 558 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 GSK3BP49841 420 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 LIG4P49917 911 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 TKTL1P51854 596 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 PNLIPRP1P54315 467 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 CDH6P55285 790 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 CDH13P55290 713 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 LINC00205P59089 165 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 DEFA1P59665 94 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 DEFA3P59666 94 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 C1QTNF8P60827 252 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 ACTR2P61160 394 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 YWHAEP62258 255 aaKnown RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 SHC2P98077 582 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 EMX1Q04741 257 aaPredicted RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 CD47Q08722 323 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 SPP2Q13103 211 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 DMP1Q13316 513 aaPredicted RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 KEAP1Q14145 624 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 TBCEQ15813 527 aaPredicted RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 LRRC26Q2I0M4 334 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 SMTNL2Q2TAL5 461 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 CTU2Q2VPK5 515 aaKnown RBP3.09□□□□□ -1.91
HERC1-203ENST00000558532 ZNF260Q3ZCT1 412 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 ZNF404Q494X3 552 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 ZFP69Q49AA0 526 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 MIDNQ504T8 468 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 PAGE2BQ5JRK9 111 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 KCNT1Q5JUK3 1230 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 MLIPQ5VWP3 458 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 FAM205BPQ63HN1 556 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 LRRC8EQ6NSJ5 796 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 CES5AQ6NT32 575 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 TRNP1Q6NT89 227 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 NEK5Q6P3R8 708 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 C19orf48Q6RUI8 117 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 TBPL2Q6SJ96 375 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 CREB3L2Q70SY1 520 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 RTL10Q7L3V2 364 aa3.09□□□□□ -1.91
HERC1-203ENST00000558532 CMC1Q7Z7K0 106 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms