RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 NEK2P51955 445 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 EFNA3P52797 238 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 MLLT10P55197 1068 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 LCP2Q13094 533 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 ZNF169Q14929 603 aaPredicted RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 ELAVL1Q15717 326 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 INPP5JQ15735 1006 aaPredicted RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 CFAP157Q5JU67 520 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 ACER2Q5QJU3 275 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 MRM1Q6IN84 353 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 ADNP2Q6IQ32 1131 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 ZNF793Q6ZN11 406 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 GPRIN3Q6ZVF9 776 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 RPS19BP1Q86WX3 136 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 NUDT13Q86X67 352 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 SIRT6Q8N6T7 355 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 GBP7Q8N8V2 638 aaPredicted RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 CCDC63Q8NA47 563 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 MORN4Q8NDC4 146 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 B3GNT7Q8NFL0 401 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 METTL6Q8TCB7 284 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 EPS8L3Q8TE67 593 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 SELENOMQ8WWX9 145 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 SREK1Q8WXA9 508 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 TSLPQ969D9 159 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 NSUN5Q96P11 429 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 MAPKAP1Q9BPZ7 522 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 MESP1Q9BRJ9 268 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 PELOQ9BRX2 385 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 DEFB126Q9BYW3 111 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 SLC29A3Q9BZD2 475 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 RPF2Q9H7B2 306 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 ZBTB20Q9HC78 741 aaPredicted RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 NECTIN3Q9NQS3 549 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 PNO1Q9NRX1 252 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 AGPAT4Q9NRZ5 378 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 VPS29Q9UBQ0 182 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 LGALS13Q9UHV8 139 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 FBXW2Q9UKT8 454 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 VPS4AQ9UN37 437 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 PPIEQ9UNP9 301 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 PLLPQ9Y342 182 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 PCDHGB6Q9Y5F9 930 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 COPG1Q9Y678 874 aaKnown RBP7.94□□□□□ -1.14
TPM1-213ENST00000558400 BSNQ9UPA5 3926 aa7.94□□□□□ -1.14
TPM1-213ENST00000558400 SERTM1A2A2V5 107 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 OR5H15A6NDH6 313 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 G3V2L1 256 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 FCHO1O14526 889 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 TRIM13O60858 407 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 ERLIN1O75477 346 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 ZFAND5O76080 213 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 MYO1DO94832 1006 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 OR4F21O95013 312 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 ESRRBO95718 433 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 FAM58BPP0C7Q3 252 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 TNFSF10P50591 281 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 NAGLUP54802 743 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 TRA2BP62995 288 aaKnown RBP7.93□□□□□ -1.14
TPM1-213ENST00000558400 UBAP2LQ14157 1087 aaKnown RBP7.93□□□□□ -1.14
TPM1-213ENST00000558400 SGO1Q5FBB7 561 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 CCNYL2Q5T2Q4 361 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 LETMD1Q6P1Q0 360 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 TRABD2AQ86V40 505 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 SHISA5Q8N114 240 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 ARMC10Q8N2F6 343 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 METTL4Q8N3J2 472 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 CCNYL1Q8N7R7 359 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 CDYL2Q8N8U2 506 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 ZNF454Q8N9F8 522 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 FAM47BQ8NA70 645 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 GALNT11Q8NCW6 608 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 NFAM1Q8NET5 270 aaPredicted RBP7.93□□□□□ -1.14
TPM1-213ENST00000558400 OR1N1Q8NGS0 311 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 OR14A16Q8NHC5 309 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 MIB2Q96AX9 1013 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 VMP1Q96GC9 406 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 CNDP1Q96KN2 507 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 ART5Q96L15 291 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 TMEM237Q96Q45 408 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 SMC6Q96SB8 1091 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 KCNK17Q96T54 332 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 UTP23Q9BRU9 249 aaKnown RBP7.93□□□□□ -1.14
TPM1-213ENST00000558400 TRMOQ9BU70 441 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.93□□□□□ -1.14
TPM1-213ENST00000558400 OXSMQ9NWU1 459 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 MKS1Q9NXB0 559 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 PSME2Q9UL46 239 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 SLC12A4Q9UP95 1085 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 ATG4BQ9Y4P1 393 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 ASB4Q9Y574 426 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 NBASA2RRP1 2371 aa7.93□□□□□ -1.14
TPM1-213ENST00000558400 A0A0A6YYD5 115 aa7.92□□□□□ -1.14
TPM1-213ENST00000558400 A8MUA0 341 aa7.92□□□□□ -1.14
TPM1-213ENST00000558400 MANBAO00462 879 aa7.92□□□□□ -1.14
TPM1-213ENST00000558400 PPP6CO00743 305 aa7.92□□□□□ -1.14
TPM1-213ENST00000558400 CRCPO75575 148 aa7.92□□□□□ -1.14
TPM1-213ENST00000558400 GPR75O95800 540 aa7.92□□□□□ -1.14
TPM1-213ENST00000558400 WDPCPO95876 746 aa7.92□□□□□ -1.14
TPM1-213ENST00000558400 PDYNP01213 254 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms