RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 SLC35C1Q96A29 364 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 RFT1Q96AA3 541 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 ERO1AQ96HE7 468 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 RCHY1Q96PM5 261 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 PRMT1Q99873 361 aaKnown RBP2.59□□□□□ -1.99
SPG11-206ENST00000558093 APOL2Q9BQE5 337 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 SLC39A8Q9C0K1 460 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 CUTCQ9NTM9 273 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 FBXL5Q9UKA1 691 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 BLOC1S6Q9UL45 172 aa2.59□□□□□ -1.99
SPG11-206ENST00000558093 MRPL11Q9Y3B7 192 aaKnown RBP2.59□□□□□ -1.99
SPG11-206ENST00000558093 ABCC9O60706 1549 aa2.58□□□□□ -2
SPG11-206ENST00000558093 TEX48A0A1B0GUV7 120 aa2.58□□□□□ -2
SPG11-206ENST00000558093 BCLAF3A2AJT9 711 aaKnown RBP2.58□□□□□ -2
SPG11-206ENST00000558093 CTDSPLO15194 276 aa2.58□□□□□ -2
SPG11-206ENST00000558093 PRDM1O75626 825 aa2.58□□□□□ -2
SPG11-206ENST00000558093 LETM1O95202 739 aaPredicted RBP2.58□□□□□ -2
SPG11-206ENST00000558093 THY1P04216 161 aa2.58□□□□□ -2
SPG11-206ENST00000558093 ZFYP08048 801 aaPredicted RBP2.58□□□□□ -2
SPG11-206ENST00000558093 CCDC159P0C7I6 412 aa2.58□□□□□ -2
SPG11-206ENST00000558093 KRT3P12035 628 aa2.58□□□□□ -2
SPG11-206ENST00000558093 DESP17661 470 aa2.58□□□□□ -2
SPG11-206ENST00000558093 ACKR3P25106 362 aa2.58□□□□□ -2
SPG11-206ENST00000558093 PPP2R1AP30153 589 aa2.58□□□□□ -2
SPG11-206ENST00000558093 TIA1P31483 386 aaKnown RBP eCLIP2.58□□□□□ -2
SPG11-206ENST00000558093 TNNT3P45378 269 aaPredicted RBP2.58□□□□□ -2
SPG11-206ENST00000558093 SH3BGRP55822 239 aaPredicted RBP2.58□□□□□ -2
SPG11-206ENST00000558093 RPS27AP62979 156 aaKnown RBP2.58□□□□□ -2
SPG11-206ENST00000558093 TFCP2Q12800 502 aa2.58□□□□□ -2
SPG11-206ENST00000558093 TMED1Q13445 227 aa2.58□□□□□ -2
SPG11-206ENST00000558093 TTC31Q49AM3 519 aaPredicted RBP2.58□□□□□ -2
SPG11-206ENST00000558093 ATAD3CQ5T2N8 411 aa2.58□□□□□ -2
SPG11-206ENST00000558093 ZNF776Q68DI1 518 aaPredicted RBP2.58□□□□□ -2
SPG11-206ENST00000558093 PM20D1Q6GTS8 502 aa2.58□□□□□ -2
SPG11-206ENST00000558093 NEPROQ6NW34 567 aa2.58□□□□□ -2
SPG11-206ENST00000558093 IRGCQ6NXR0 463 aa2.58□□□□□ -2
SPG11-206ENST00000558093 ALKBH5Q6P6C2 394 aaKnown RBP2.58□□□□□ -2
SPG11-206ENST00000558093 TMEM64Q6YI46 380 aa2.58□□□□□ -2
SPG11-206ENST00000558093 ZNF730Q6ZMV8 503 aa2.58□□□□□ -2
SPG11-206ENST00000558093 FAM47EQ6ZV65 393 aa2.58□□□□□ -2
SPG11-206ENST00000558093 OTUD6AQ7L8S5 288 aa2.58□□□□□ -2
SPG11-206ENST00000558093 NUFIP2Q7Z417 695 aaKnown RBP2.58□□□□□ -2
SPG11-206ENST00000558093 ZNF444Q8N0Y2 327 aaPredicted RBP2.58□□□□□ -2
SPG11-206ENST00000558093 KLHL30-AS1Q8NEE0 82 aa2.58□□□□□ -2
SPG11-206ENST00000558093 GPR148Q8TDV2 347 aa2.58□□□□□ -2
SPG11-206ENST00000558093 CKAP2Q8WWK9 683 aa2.58□□□□□ -2
SPG11-206ENST00000558093 SGF29Q96ES7 293 aa2.58□□□□□ -2
SPG11-206ENST00000558093 CNOT6LQ96LI5 555 aaKnown RBP2.58□□□□□ -2
SPG11-206ENST00000558093 ATG101Q9BSB4 218 aa2.58□□□□□ -2
SPG11-206ENST00000558093 IDI2Q9BXS1 227 aa2.58□□□□□ -2
SPG11-206ENST00000558093 EDEM3Q9BZQ6 932 aa2.58□□□□□ -2
SPG11-206ENST00000558093 VIPAS39Q9H9C1 493 aa2.58□□□□□ -2
SPG11-206ENST00000558093 TNFRSF19Q9NS68 423 aa2.58□□□□□ -2
SPG11-206ENST00000558093 RBM28Q9NW13 759 aaKnown RBP2.58□□□□□ -2
SPG11-206ENST00000558093 CLEC5AQ9NY25 188 aa2.58□□□□□ -2
SPG11-206ENST00000558093 HOXC10Q9NYD6 342 aa2.58□□□□□ -2
SPG11-206ENST00000558093 B4GALT7Q9UBV7 327 aa2.58□□□□□ -2
SPG11-206ENST00000558093 NIP7Q9Y221 180 aaKnown RBP eCLIP2.58□□□□□ -2
SPG11-206ENST00000558093 TMED7Q9Y3B3 224 aa2.58□□□□□ -2
SPG11-206ENST00000558093 NAALAD2Q9Y3Q0 740 aa2.58□□□□□ -2
SPG11-206ENST00000558093 HBS1LQ9Y450 684 aaKnown RBP2.58□□□□□ -2
SPG11-206ENST00000558093 TRBV5-4A0A0C4DH59 114 aa2.57□□□□□ -2
SPG11-206ENST00000558093 ANKDD1BA6NHY2 528 aa2.57□□□□□ -2
SPG11-206ENST00000558093 ST8SIA3O43173 380 aa2.57□□□□□ -2
SPG11-206ENST00000558093 HSPA4LO95757 839 aa2.57□□□□□ -2
SPG11-206ENST00000558093 BAG2O95816 211 aa2.57□□□□□ -2
SPG11-206ENST00000558093 IGHG1P01857 330 aa2.57□□□□□ -2
SPG11-206ENST00000558093 EZRP15311 586 aaKnown RBP2.57□□□□□ -2
SPG11-206ENST00000558093 ATP6V1B1P15313 513 aa2.57□□□□□ -2
SPG11-206ENST00000558093 PAX7P23759 505 aa2.57□□□□□ -2
SPG11-206ENST00000558093 CCND3P30281 292 aaPredicted RBP2.57□□□□□ -2
SPG11-206ENST00000558093 CD86P42081 329 aa2.57□□□□□ -2
SPG11-206ENST00000558093 IER3P46695 156 aa2.57□□□□□ -2
SPG11-206ENST00000558093 ADARP55265 1226 aaKnown RBP2.57□□□□□ -2
SPG11-206ENST00000558093 FKBP1BP68106 108 aa2.57□□□□□ -2
SPG11-206ENST00000558093 GSTO1P78417 241 aa2.57□□□□□ -2
SPG11-206ENST00000558093 AKAP17AQ02040 695 aaKnown RBP2.57□□□□□ -2
SPG11-206ENST00000558093 SLC3A1Q07837 685 aa2.57□□□□□ -2
SPG11-206ENST00000558093 DMTNQ08495 405 aa2.57□□□□□ -2
SPG11-206ENST00000558093 MRPL28Q13084 256 aaKnown RBP2.57□□□□□ -2
SPG11-206ENST00000558093 GPR50Q13585 617 aa2.57□□□□□ -2
SPG11-206ENST00000558093 PTK6Q13882 451 aa2.57□□□□□ -2
SPG11-206ENST00000558093 CYLC2Q14093 348 aaPredicted RBP2.57□□□□□ -2
SPG11-206ENST00000558093 Q1RN00 199 aa2.57□□□□□ -2
SPG11-206ENST00000558093 NHLRC3Q5JS37 347 aa2.57□□□□□ -2
SPG11-206ENST00000558093 TEX35Q5T0J7 233 aa2.57□□□□□ -2
SPG11-206ENST00000558093 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
SPG11-206ENST00000558093 PLPP4Q5VZY2 271 aa2.57□□□□□ -2
SPG11-206ENST00000558093 ARMCX5Q6P1M9 558 aa2.57□□□□□ -2
SPG11-206ENST00000558093 CCBE1Q6UXH8 406 aaPredicted RBP2.57□□□□□ -2
SPG11-206ENST00000558093 GALNTL5Q7Z4T8 443 aa2.57□□□□□ -2
SPG11-206ENST00000558093 NLRP14Q86W24 1093 aa2.57□□□□□ -2
SPG11-206ENST00000558093 VSIG1Q86XK7 387 aa2.57□□□□□ -2
SPG11-206ENST00000558093 CD99L2Q8TCZ2 262 aa2.57□□□□□ -2
SPG11-206ENST00000558093 GIMAP1Q8WWP7 306 aa2.57□□□□□ -2
SPG11-206ENST00000558093 FAM162AQ96A26 154 aa2.57□□□□□ -2
SPG11-206ENST00000558093 RBM18Q96H35 190 aaKnown RBP2.57□□□□□ -2
SPG11-206ENST00000558093 JAKMIP1Q96N16 626 aaKnown RBP2.57□□□□□ -2
SPG11-206ENST00000558093 FAM210AQ96ND0 272 aa2.57□□□□□ -2
SPG11-206ENST00000558093 C17orf62Q9BQA9 187 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms