RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 C12orf73Q69YU5 71 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 KIAA1841Q6NSI8 718 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 REEP3Q6NUK4 255 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 HSDL2Q6YN16 418 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 SLCO4C1Q6ZQN7 724 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 TMPRSS11BQ86T26 416 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 GPR65Q8IYL9 337 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF461Q8TAF7 563 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 CREB3L4Q8TEY5 395 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 C16orf78Q8WTQ4 265 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 VOPP1Q96AW1 172 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 TMEM159Q96B96 161 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 MIXL1Q9H2W2 232 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 ZDHHC6Q9H6R6 413 aa11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 TXNL4BQ9NX01 149 aaKnown RBP11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 LSM7Q9UK45 103 aaKnown RBP11.27□□□□□ -0.61
VIPAS39-211ENST00000557658 A0A1W2PQL4 384 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 C5orf58C9J3I9 102 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 FFAR1O14842 300 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 SGTAO43765 313 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 OR10H3O60404 316 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 SLC16A8O95907 504 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 TSPAN19P0C672 248 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 FLT3LGP49771 235 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 LIM2P55344 173 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 GALK2Q01415 458 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 PUM1Q14671 1186 aaKnown RBP eCLIP11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 HEPACAMQ14CZ8 416 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 QPRTQ15274 297 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 OCLNQ16625 522 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 MPEG1Q2M385 716 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 DCST1Q5T197 706 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 DDI2Q5TDH0 399 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 PPP2R2DQ66LE6 453 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 C22orf39Q6P5X5 142 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 UNC5DQ6UXZ4 953 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 CCDC149Q6ZUS6 474 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 IFNL1Q8IU54 200 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 NPAS4Q8IUM7 802 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 IL17RCQ8NAC3 791 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 ENKURQ8TC29 256 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 UBASH3BQ8TF42 649 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 JPH3Q8WXH2 748 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 NEIL2Q969S2 332 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 KIAA1143Q96AT1 154 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 MTERF3Q96E29 417 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 TMEM121BQ9BXQ6 578 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 CPEB1Q9BZB8 566 aaKnown RBP11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 ARHGAP39Q9C0H5 1083 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 FAM83DQ9H4H8 585 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 MYNNQ9NPC7 610 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 DOCK6Q96HP0 2047 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 TMEM202A6NGA9 273 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 FOXE1O00358 373 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 QSOX1O00391 747 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 FAAHO00519 579 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 HLA-DMAP28067 261 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 CTSOP43234 321 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 WDR5P61964 334 aaKnown RBP11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 CD83Q01151 205 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 E2F2Q14209 437 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 MPPE1Q53F39 396 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 PYDC2Q56P42 97 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 FAM71E1Q6IPT2 247 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 USP30Q70CQ3 517 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 ARMCX6Q7L4S7 300 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 DNAJB7Q7Z6W7 309 aaPredicted RBP11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 TMEM150AQ86TG1 271 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 PEX5LQ8IYB4 626 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 CACTIN-AS1Q8N1I8 211 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 TCEANCQ8N8B7 351 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 FIBINQ8TAL6 211 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 SCAMP4Q969E2 229 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 SAMD11Q96NU1 681 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 NELL2Q99435 816 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 GON7Q9BXV9 100 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 MCOLN1Q9GZU1 580 aa11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 POLR2J3Q9H1A7 115 aaKnown RBP11.26□□□□□ -0.61
VIPAS39-211ENST00000557658 PLD2O14939 933 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 POLR1CO15160 346 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 HOXA2O43364 376 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 ABLIM3O94929 683 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 IGFBP1P08833 259 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 UQCRC2P22695 453 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 ELAVL4P26378 380 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 SLC9A3P48764 834 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 ZNF157P51786 506 aaPredicted RBP11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 TAS2R50P59544 299 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 PAQR6Q6TCH4 344 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 RNF180Q86T96 592 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 CAMKK1Q8N5S9 505 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 DBF4BQ8NFT6 615 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 WDR48Q8TAF3 677 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 FOXJ1Q92949 421 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 TIFAQ96CG3 184 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 SLC6A18Q96N87 628 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 FOPNLQ96NB1 174 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 TEFMQ96QE5 360 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 BEX2Q9BXY8 128 aa11.25□□□□□ -0.61
VIPAS39-211ENST00000557658 NLNQ9BYT8 704 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms