RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 RPS6KA6Q9UK32 745 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 FAF1Q9UNN5 650 aaPredicted RBP11.81□□□□□ -0.52
SHMT2-233ENST00000557529 SAMD4AQ9UPU9 718 aaKnown RBP11.81□□□□□ -0.52
SHMT2-233ENST00000557529 SNX8Q9Y5X2 465 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 MDC1Q14676 2089 aaKnown RBP11.81□□□□□ -0.52
SHMT2-233ENST00000557529 TRIOO75962 3097 aa11.81□□□□□ -0.52
SHMT2-233ENST00000557529 A0A1B0GTQ1 180 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 PGRMC2O15173 223 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 HRO43593 1189 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 DUX1O43812 170 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 ALPPL2P10696 532 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 CSNK2A2P19784 350 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-233ENST00000557529 ATP6V1C1P21283 382 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 CPN2P22792 545 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 EPHA8P29322 1005 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-233ENST00000557529 ALDH4A1P30038 563 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 GPC1P35052 558 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 MAGEA8P43361 318 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 PRIM2P49643 509 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 NCBP2P52298 156 aaKnown RBP eCLIP11.8□□□□□ -0.52
SHMT2-233ENST00000557529 MVDP53602 400 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 GPLD1P80108 840 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 TNFRSF17Q02223 184 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 HSPB3Q12988 150 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 SPIDRQ14159 915 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 NR1D2Q14995 579 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 SHBQ15464 509 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 ATP6AP1Q15904 470 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 ADRM1Q16186 407 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 LRRC36Q1X8D7 754 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 SAXO2Q658L1 398 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 OR52E8Q6IFG1 317 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 NIPAL1Q6NVV3 410 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 FAM92BQ6ZTR7 304 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 FKBP9P1Q75LS8 142 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 SLC35F3Q8IY50 421 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 CLEC4FQ8N1N0 589 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 ANKFN1Q8N957 763 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 FBXO30Q8TB52 745 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 NCSTNQ92542 709 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 PIGKQ92643 395 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 CENPNQ96H22 339 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-233ENST00000557529 RNF145Q96MT1 663 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 AMDHD1Q96NU7 426 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 SEPHS2Q99611 448 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 DPH2Q9BQC3 489 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-233ENST00000557529 CHID1Q9BWS9 393 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 NPLQ9BXD5 320 aaPredicted RBP11.8□□□□□ -0.52
SHMT2-233ENST00000557529 GLIPR2Q9H4G4 154 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 TMEM38AQ9H6F2 299 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 FAM60AQ9NP50 221 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 KCMF1Q9P0J7 381 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 CES1P1Q9UKY3 287 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 CNOT11Q9UKZ1 510 aaKnown RBP11.8□□□□□ -0.52
SHMT2-233ENST00000557529 PADI4Q9UM07 663 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 PLCL2Q9UPR0 1127 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 ZNF780BQ9Y6R6 833 aa11.8□□□□□ -0.52
SHMT2-233ENST00000557529 IGHV1OR21-1A0A087WYE8 117 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 GLOD5A6NK44 160 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 SH3BP5O60239 455 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 GALR3O60755 368 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 TNFRSF21O75509 655 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 ERAL1O75616 437 aaKnown RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 SERPINA1P01009 418 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 LDLRP01130 860 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 GIMD1P0DJR0 217 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 KDELR2P33947 212 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 MPIP34949 423 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 MLLT3P42568 568 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 CCT3P49368 545 aaKnown RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 LIM2P55344 173 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 CEBPEQ15744 281 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 NDUFA9Q16795 377 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 ZNF630Q2M218 657 aaPredicted RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 PRTGQ2VWP7 1150 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 INTS11Q5TA45 600 aaKnown RBP11.79□□□□□ -0.52
SHMT2-233ENST00000557529 C18orf63Q68DL7 685 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 HMBOX1Q6NT76 420 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 BHLHB9Q6PI77 547 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 TMEM64Q6YI46 380 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 DGLUCYQ7Z3D6 616 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 RNF130Q86XS8 419 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 PDSS2Q86YH6 399 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 PLXDC1Q8IUK5 500 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 KBTBD2Q8IY47 623 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 TMEM105Q8N8V8 129 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 ICA1LQ8NDH6 482 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 OR6C4Q8NGE1 309 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 OR5AK3PQ8NH89 298 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 CEP76Q8TAP6 659 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 SFXN5Q8TD22 340 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 KLHL6Q8WZ60 621 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 EME1Q96AY2 570 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 MOAP1Q96BY2 351 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 SLC47A1Q96FL8 570 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 TGM7Q96PF1 710 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 ANKHQ9HCJ1 492 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 PDE7BQ9NP56 450 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 C8orf4Q9NR00 106 aa11.79□□□□□ -0.52
SHMT2-233ENST00000557529 SIRT3Q9NTG7 399 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms