RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 SLC39A11Q8N1S5 342 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 NUP43Q8NFH3 380 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 SMG9Q9H0W8 520 aaKnown RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 OBP2AQ9NY56 170 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 TBC1D24Q9ULP9 559 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 A0A096LPI6 279 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 A0A0J9YY10 115 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 PDLIM1O00151 329 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 RTCAO00442 366 aaKnown RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 FAAHO00519 579 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 DNAJB6O75190 326 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 CCNOP22674 350 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 GSTT1P30711 240 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 CDH11P55287 796 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 MTPNP58546 118 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 GNG2P59768 71 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 WDR5P61964 334 aaKnown RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 SPIN3Q5JUX0 258 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 AURKBQ96GD4 344 aaPredicted RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 USB1Q9BQ65 265 aaKnown RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 EURLQ9NYK6 297 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 BOKQ9UMX3 212 aaPredicted RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 MAP1BP46821 2468 aaKnown RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 A0A075B6Q4 140 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 SCAMP1O15126 338 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 SLITRK5O94991 958 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 CSNK2A1P68400 391 aaPredicted RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 ZNF234Q14588 700 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 ZNF460Q14592 562 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 HNRNPA1L2Q32P51 320 aaKnown RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 UGT3A2Q3SY77 523 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 NXPE4Q6UWF7 544 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 SCML4Q8N228 414 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 DEFB119Q8N690 84 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 ZNF283Q8N7M2 679 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 OR2T33Q8NG76 320 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 C7orf43Q8WVR3 580 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 RPF2Q9H7B2 306 aaKnown RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 A0A1W2PPL8 197 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 TTC24A2A3L6 582 aaPredicted RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 SLC33A1O00400 549 aaPredicted RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 IL3P08700 152 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 PNMTP11086 282 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 RPS3P23396 243 aaKnown RBP eCLIP8.03□□□□□ -1.125e-7■□□□□ 10.4
CHD8-213ENST00000557364 GABRA3P34903 492 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 MERTKQ12866 999 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 METTL25Q8N6Q8 603 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 C22orf15Q8WYQ4 148 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 DPH7Q9BTV6 452 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 GPR62Q9BZJ7 368 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 MEPEQ9NQ76 525 aaPredicted RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 A0A0D9SEW6 157 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 MBLAC1A4D2B0 266 aaPredicted RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 LSM1O15116 133 aaKnown RBP8.03□□□□□ -1.12
CHD8-213ENST00000557364 H2BFMP0C1H6 154 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 DCAF7P61962 342 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 OR5L1Q8NGL2 311 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 NFKBIDQ8NI38 313 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 SHKBP1Q8TBC3 707 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 FRS2Q8WU20 508 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 ALPK1Q96QP1 1244 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 ZFYVE21Q9BQ24 234 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 BTAF1O14981 1849 aa8.03□□□□□ -1.12
CHD8-213ENST00000557364 HEXAP06865 529 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 NCEH1Q6PIU2 408 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 PMM1Q92871 262 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 IP6K3Q96PC2 410 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 KLHL13Q9P2N7 655 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 SIX4Q9UIU6 781 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 N4BP2Q86UW6 1770 aaPredicted RBP8.02□□□□□ -1.13
CHD8-213ENST00000557364 IGKV6-21A0A0C4DH24 114 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 A6NIZ1 184 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 BCKDHAP12694 445 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 IFI30P13284 250 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 RAP1BP61224 184 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 RAP1AP62834 184 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 TSC22D1Q15714 1073 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 DCAF12Q5T6F0 453 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 IDNKQ5T6J7 187 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 HTR3DQ70Z44 454 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 ZFAND4Q86XD8 727 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 MRPL43Q8N983 215 aaKnown RBP8.02□□□□□ -1.13
CHD8-213ENST00000557364 MCHR1Q99705 422 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 OR6C2Q9NZP2 312 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 KCND3Q9UK17 655 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 A0A0G2JN53 185 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 TTC34A8MYJ7 566 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 RNF225M0QZC1 329 aaPredicted RBP8.02□□□□□ -1.13
CHD8-213ENST00000557364 PLOD2O00469 737 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 GNB5O14775 395 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 IL1R2P27930 398 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 TBPL1P62380 186 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 SLC7A9P82251 487 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 EVX2Q03828 476 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 ADAM15Q13444 863 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 PRAMEF17Q5VTA0 474 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 OR4C11Q6IEV9 310 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 OR4F3Q6IEY1 312 aa8.02□□□□□ -1.13
CHD8-213ENST00000557364 FRMD7Q6ZUT3 714 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms