RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 CAPN12Q6ZSI9 719 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 TMPRSS11BQ86T26 416 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 CNTN4Q8IWV2 1026 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 LRRC75A-AS1Q8N1F1 130 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 LRRC25Q8N386 305 aaPredicted RBP9.43□□□□□ -0.9
RDH11-210ENST00000557331 NKAPQ8N5F7 415 aaKnown RBP9.43□□□□□ -0.9
RDH11-210ENST00000557331 PAQR8Q8TEZ7 354 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 PTPMT1Q8WUK0 201 aaPredicted RBP9.43□□□□□ -0.9
RDH11-210ENST00000557331 NUDT8Q8WV74 236 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 SMPDL3BQ92485 455 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 PIGTQ969N2 578 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 ISL2Q96A47 359 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 ARSGQ96EG1 525 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 RBM18Q96H35 190 aaKnown RBP9.43□□□□□ -0.9
RDH11-210ENST00000557331 PWWP2AQ96N64 755 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 ZFP3Q96NJ6 502 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 DACH2Q96NX9 599 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 SECISBP2Q96T21 854 aaKnown RBP9.43□□□□□ -0.9
RDH11-210ENST00000557331 NAP1L3Q99457 506 aaPredicted RBP9.43□□□□□ -0.9
RDH11-210ENST00000557331 PIP5K1AQ99755 562 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 YIPF4Q9BSR8 244 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 OR8D2Q9GZM6 311 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 REXO4Q9GZR2 422 aaKnown RBP9.43□□□□□ -0.9
RDH11-210ENST00000557331 KLHL31Q9H511 634 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 CNOT10Q9H9A5 744 aaKnown RBP9.43□□□□□ -0.9
RDH11-210ENST00000557331 IARS2Q9NSE4 1012 aaKnown RBP9.43□□□□□ -0.9
RDH11-210ENST00000557331 TUBA8Q9NY65 449 aaPredicted RBP9.43□□□□□ -0.9
RDH11-210ENST00000557331 GPRC5BQ9NZH0 403 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 GUCA1BQ9UMX6 200 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 DAPP1Q9UN19 280 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 SLC22A14Q9Y267 594 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 CLDN16Q9Y5I7 305 aa9.43□□□□□ -0.9
RDH11-210ENST00000557331 CD8B2A6NJW9 211 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 GOLGA6L6A8MZA4 724 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 C17orf105B2RV13 164 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 CYR61O00622 381 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 NRDCO43847 1150 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 PRKNO60260 465 aaPredicted RBP9.42□□□□□ -0.9
RDH11-210ENST00000557331 GUCA1CO95843 209 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 B3GALT4O96024 378 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 GCKP35557 465 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 KCNC1P48547 511 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 LIM2P55344 173 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 DCAF7P61962 342 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 RPP38P78345 283 aaKnown RBP9.42□□□□□ -0.9
RDH11-210ENST00000557331 NKX6-1P78426 367 aaPredicted RBP9.42□□□□□ -0.9
RDH11-210ENST00000557331 TIAL1Q01085 375 aaKnown RBP eCLIP9.42□□□□□ -0.9
RDH11-210ENST00000557331 LAPTM5Q13571 262 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 RUNX2Q13950 521 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 PCBP2Q15366 365 aaKnown RBP eCLIP9.42□□□□□ -0.9
RDH11-210ENST00000557331 SPANXN3Q5MJ09 141 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 FAM45BPQ6NSW5 357 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 ADAMTSL2Q86TH1 951 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 TCAIMQ8N3R3 496 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 SIMC1Q8NDZ2 872 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 WFDC11Q8NEX6 87 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 TRIM58Q8NG06 486 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 FAM45AQ8TCE6 357 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 SLC2A12Q8TD20 617 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 SPACA9Q96E40 222 aaPredicted RBP9.42□□□□□ -0.9
RDH11-210ENST00000557331 SIGLEC10Q96LC7 697 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 TSNARE1Q96NA8 513 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 KCNC2Q96PR1 638 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 NDNQ99608 321 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 PELOQ9BRX2 385 aaKnown RBP9.42□□□□□ -0.9
RDH11-210ENST00000557331 TBCDQ9BTW9 1192 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 BDH2Q9BUT1 245 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 ACBD3Q9H3P7 528 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 ZNF703Q9H7S9 590 aaPredicted RBP9.42□□□□□ -0.9
RDH11-210ENST00000557331 PLEKHF2Q9H8W4 249 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 CALHM2Q9HA72 323 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 SH2D2AQ9NP31 389 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 MS4A12Q9NXJ0 267 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 LIPGQ9Y5X9 500 aa9.42□□□□□ -0.9
RDH11-210ENST00000557331 NINQ8N4C6 2090 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 A0A0G2JMM0 328 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 A0A1W2PPB8 328 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 A0A1W2PRS3 328 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 CLCA1A8K7I4 914 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 KIR3DP1A8MWS1 328 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 TP53I11O14683 189 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 CASKO14936 926 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 SNX4O95219 450 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 C1QAP02745 245 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 AHSGP02765 367 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 CCL3P10147 92 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 TACR1P25103 407 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 CTSSP25774 331 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 TLX1P31314 330 aaPredicted RBP9.41□□□□□ -0.9
RDH11-210ENST00000557331 DNASE1L1P49184 302 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 PCYT1AP49585 367 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 CDKN2DP55273 166 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 CRYMQ14894 314 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 HIST2H2ACQ16777 129 aaPredicted RBP9.41□□□□□ -0.9
RDH11-210ENST00000557331 ZNF791Q3KP31 576 aaPredicted RBP9.41□□□□□ -0.9
RDH11-210ENST00000557331 ACSF3Q4G176 576 aaPredicted RBP9.41□□□□□ -0.9
RDH11-210ENST00000557331 TMEM35AQ53FP2 167 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 PAGE2BQ5JRK9 111 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 CDKL4Q5MAI5 379 aa9.41□□□□□ -0.9
RDH11-210ENST00000557331 NSUN5P2Q63ZY6 315 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms