RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 LRIT2A6NDA9 550 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 MBD3L3A6NE82 208 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-221ENST00000557293 CD8B2A6NJW9 211 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 NRDCO43847 1150 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 SMPD2O60906 423 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 IL18BPO95998 194 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 C1QAP02745 245 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 IFNA16P05015 189 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 PAMP19021 973 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 CTSSP25774 331 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 MAGEA6P43360 314 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 KCNJ1P48048 391 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 CDKN2DP55273 166 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 THOC5Q13769 683 aaKnown RBP11.51□□□□□ -0.57
PSEN1-221ENST00000557293 PRAMEF20Q5VT98 475 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 ANKRD22Q5VYY1 191 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 VASNQ6EMK4 673 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 LRRC8EQ6NSJ5 796 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 DRICH1Q6PGQ1 229 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-221ENST00000557293 C4orf22Q6V702 233 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 YTHDF3Q7Z739 585 aaKnown RBP11.51□□□□□ -0.57
PSEN1-221ENST00000557293 SYCE1Q8N0S2 351 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 OR14A16Q8NHC5 309 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 MBD3L2Q8NHZ7 208 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-221ENST00000557293 SLC2A12Q8TD20 617 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 DAZLQ92904 295 aaKnown RBP11.51□□□□□ -0.57
PSEN1-221ENST00000557293 GAL3ST3Q96A11 431 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 ZNF669Q96BR6 464 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-221ENST00000557293 NDNQ99608 321 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 ARL15Q9NXU5 204 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 TRMT6Q9UJA5 497 aaKnown RBP11.51□□□□□ -0.57
PSEN1-221ENST00000557293 CNOT11Q9UKZ1 510 aaKnown RBP11.51□□□□□ -0.57
PSEN1-221ENST00000557293 CHCHD2Q9Y6H1 151 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-221ENST00000557293 MXRA5Q9NR99 2828 aa11.51□□□□□ -0.57
PSEN1-221ENST00000557293 TRIM3O75382 744 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-221ENST00000557293 HIST1H2AGP0C0S8 130 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-221ENST00000557293 HIST1H2ADP20671 130 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 SOX18P35713 384 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 SLCO1A2P46721 670 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 RGS4P49798 205 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 LIM2P55344 173 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 FOXF2Q12947 444 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 CAPRIN1Q14444 709 aaKnown RBP11.5□□□□□ -0.57
PSEN1-221ENST00000557293 ADPRMQ3LIE5 342 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 RBM20Q5T481 1227 aaKnown RBP11.5□□□□□ -0.57
PSEN1-221ENST00000557293 FNDC7Q5VTL7 733 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 VN1R5Q7Z5H4 357 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 THOC6Q86W42 341 aaKnown RBP11.5□□□□□ -0.57
PSEN1-221ENST00000557293 PALM2Q8IXS6 379 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 KLHDC8AQ8IYD2 350 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 MYO1HQ8N1T3 1032 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 OR5L2Q8NGL0 311 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 PIGTQ969N2 578 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 ISL2Q96A47 359 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 ANKRD9Q96BM1 317 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-221ENST00000557293 NTNG2Q96CW9 530 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 WDYHV1Q96HA8 205 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 HIST1H2AHQ96KK5 128 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 HIST1H2AJQ99878 128 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 AIF1LQ9BQI0 150 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 H2AFJQ9BTM1 129 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 BOKQ9UMX3 212 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-221ENST00000557293 DAPP1Q9UN19 280 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 CAPN6Q9Y6Q1 641 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 DOCK7Q96N67 2140 aa11.5□□□□□ -0.57
PSEN1-221ENST00000557293 CHD3Q12873 2000 aaKnown RBP11.49□□□□□ -0.57
PSEN1-221ENST00000557293 MAGEB16A2A368 324 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 SH3D21A4FU49 640 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 DEFB108AA8MXU0 73 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 C17orf105B2RV13 164 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 EEF1E1-BLOC1S5C9J1V9 151 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 EEF1E1O43324 174 aaKnown RBP11.49□□□□□ -0.57
PSEN1-221ENST00000557293 ERI3O43414 337 aaKnown RBP11.49□□□□□ -0.57
PSEN1-221ENST00000557293 LDB3O75112 727 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 LRATO95237 230 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 ACSL3O95573 720 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 IGKV3-11P04433 115 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 SAT1P21673 171 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 OPRM1P35372 400 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 TERF1P54274 439 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 AP1S2P56377 157 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 KCNJ2P63252 427 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 CBLBQ13191 982 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 DCST1Q5T197 706 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 SEL1L2Q5TEA6 688 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 DGAT2L6Q6ZPD8 337 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 SYDE1Q6ZW31 735 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-221ENST00000557293 C9orf40Q8IXQ3 194 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 LMNTD2Q8IXW0 634 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.49□□□□□ -0.57
PSEN1-221ENST00000557293 C9orf106Q8NAJ2 232 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 NUBPLQ8TB37 319 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 IGFBPL1Q8WX77 278 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 SPACA9Q96E40 222 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-221ENST00000557293 LINGO1Q96FE5 620 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 SENP5Q96HI0 755 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-221ENST00000557293 FAR2Q96K12 515 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 SIGLEC10Q96LC7 697 aa11.49□□□□□ -0.57
PSEN1-221ENST00000557293 RBM24Q9BX46 236 aaKnown RBP11.49□□□□□ -0.57
PSEN1-221ENST00000557293 PRDM7Q9NQW5 492 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms