RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PRAMEF22A3QJZ6 481 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 EME2A4GXA9 379 aaPredicted RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 SEC14L6B5MCN3 397 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF254O75437 659 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 KLK3P07288 261 aaPredicted RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 JUNDP17535 347 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 HTRA4P83105 476 aaPredicted RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 BNIP3Q12983 259 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ISLR2Q6UXK2 745 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF598Q86UK7 904 aaKnown RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 HPSE2Q8WWQ2 592 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 PYCR2Q96C36 320 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 CMSS1Q9BQ75 279 aaKnown RBP8.53□□□□□ -1.04
SYNE3-205ENST00000557275 ACBD6Q9BR61 282 aa8.53□□□□□ -1.04
SYNE3-205ENST00000557275 A0A1W2PP18 115 aa8.52□□□□□ -1.04
SYNE3-205ENST00000557275 FKTNO75072 461 aa8.52□□□□□ -1.04
SYNE3-205ENST00000557275 PABPC4LP0CB38 370 aaKnown RBP8.52□□□□□ -1.04
SYNE3-205ENST00000557275 ECI1P42126 302 aa8.52□□□□□ -1.04
SYNE3-205ENST00000557275 IDH3AP50213 366 aa8.52□□□□□ -1.04
SYNE3-205ENST00000557275 ATXN7L3Q14CW9 347 aaPredicted RBP8.52□□□□□ -1.04
SYNE3-205ENST00000557275 RSU1Q15404 277 aa8.52□□□□□ -1.04
SYNE3-205ENST00000557275 CCM2Q9BSQ5 444 aa8.52□□□□□ -1.04
SYNE3-205ENST00000557275 EXTL2Q9UBQ6 330 aa8.52□□□□□ -1.04
SYNE3-205ENST00000557275 NAALAD2Q9Y3Q0 740 aa8.52□□□□□ -1.04
SYNE3-205ENST00000557275 CNTNAP4Q9C0A0 1308 aa8.52□□□□□ -1.04
SYNE3-205ENST00000557275 POU2F1P14859 743 aa8.52□□□□□ -1.04
SYNE3-205ENST00000557275 RARRES1P49788 294 aa8.52□□□□□ -1.04
SYNE3-205ENST00000557275 NRG1Q02297 640 aaPredicted RBP8.52□□□□□ -1.04
SYNE3-205ENST00000557275 FNDC9Q8TBE3 224 aa8.52□□□□□ -1.04
SYNE3-205ENST00000557275 ADARB2Q9NS39 739 aaKnown RBP8.52□□□□□ -1.04
SYNE3-205ENST00000557275 ANKRD26Q9UPS8 1709 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 OR6C65A6NJZ3 312 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 NPIPA2E9PIF3 369 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 NPIPA3F8WFD2 350 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 TLR5O60602 858 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 APOA2P02652 100 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 HLA-EP13747 358 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 TSTD2Q5T7W7 516 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 RFPL4BQ6ZWI9 263 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 OR4K2Q8NGD2 314 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 SPRYD4Q8WW59 207 aaPredicted RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 ZCCHC3Q9NUD5 404 aaKnown RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 CLTCQ00610 1675 aaKnown RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 BCORL1Q5H9F3 1711 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 K7EPI3 171 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 IGKV5-2P06315 115 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 AOC1P19801 751 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 LSMEM2Q8N112 164 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 C15orf54Q8N8G6 183 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 SFXN5Q8TD22 340 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 ARNTL2Q8WYA1 636 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 SHC3Q92529 594 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 PNPOQ9NVS9 261 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 YTHDF2Q9Y5A9 579 aaKnown RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 E9PI62 339 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 KLF11O14901 512 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 LRRC37A5PQ49AS3 106 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 MAGIXQ9H6Y5 334 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 EBF2Q9HAK2 575 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 CNOT1A5YKK6 2376 aaKnown RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 IQGAP1P46940 1657 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 M0R2N6 131 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 FAAHO00519 579 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 FSCN2O14926 492 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 ONECUT3O60422 494 aaPredicted RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 BCAS2O75934 225 aaPredicted RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 TP53P04637 393 aaPredicted RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 GCSHP23434 173 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 SHMT1P34896 483 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 KIAA0930Q6ICG6 404 aaPredicted RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 GAREM2Q75VX8 874 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 IQCKQ8N0W5 287 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 HIF1ANQ9NWT6 349 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 FZD4Q9ULV1 537 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 MROH2AA6NES4 1674 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 IMPA2O14732 288 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 PI4KAP42356 2102 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 GHRHRQ02643 423 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 OR6N1Q8NGY5 312 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 RRAGCQ9HB90 399 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 DKKL1Q9UK85 242 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 RNF24Q9Y225 148 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 DIP2AQ14689 1571 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 F5H5P2 479 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 SMLR1H3BR10 107 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 CXCL11O14625 94 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 ELP2Q6IA86 826 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 SPTSSAQ969W0 71 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 CGREF1Q99674 301 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 CACNG6Q9BXT2 260 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 TEX10Q9NXF1 929 aaPredicted RBP8.52□□□□□ -1.05
SYNE3-205ENST00000557275 ADRB3P13945 408 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 TAS2R46P59540 309 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 ERVK-21P61565 698 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 ACTBL2Q562R1 376 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 NOXA1Q86UR1 476 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 OR8S1Q8NH09 359 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 ASF1BQ9NVP2 202 aa8.52□□□□□ -1.05
SYNE3-205ENST00000557275 FKBPLQ9UIM3 349 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms