RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 DAZLQ92904 295 aaKnown RBP13.67□□□□□ -0.22
CHD8-211ENST00000556833 PPWD1Q96BP3 646 aaKnown RBP13.67□□□□□ -0.22
CHD8-211ENST00000556833 VPS39Q96JC1 886 aa13.67□□□□□ -0.22
CHD8-211ENST00000556833 JSRP1Q96MG2 331 aaPredicted RBP13.67□□□□□ -0.22
CHD8-211ENST00000556833 SMYD2Q9NRG4 433 aa13.67□□□□□ -0.22
CHD8-211ENST00000556833 SACM1LQ9NTJ5 587 aa13.67□□□□□ -0.22
CHD8-211ENST00000556833 CD274Q9NZQ7 290 aa13.67□□□□□ -0.22
CHD8-211ENST00000556833 MTO1Q9Y2Z2 717 aaKnown RBP13.67□□□□□ -0.22
CHD8-211ENST00000556833 NAV3Q8IVL0 2385 aa13.67□□□□□ -0.22
CHD8-211ENST00000556833 KIAA1549Q9HCM3 1950 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 FIGNL2A6NMB9 653 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 HRKO00198 91 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 CTNSO60931 367 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 CCDC166P0CW27 439 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 CD1EP15812 388 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 ZFP36L2P47974 494 aaKnown RBP13.66□□□□□ -0.22
CHD8-211ENST00000556833 TRPC1P48995 793 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 DR1Q01658 176 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 DDX39BQ13838 428 aaKnown RBP13.66□□□□□ -0.22
CHD8-211ENST00000556833 DGAT2L6Q6ZPD8 337 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 UBE3DQ7Z6J8 389 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 GPSM1Q86YR5 675 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 GPALPP1Q8IXQ4 340 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 OR14A16Q8NHC5 309 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 GPATCH1Q9BRR8 931 aaKnown RBP13.66□□□□□ -0.22
CHD8-211ENST00000556833 SLC6A15Q9H2J7 730 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 IL1RL2Q9HB29 575 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 PRDM7Q9NQW5 492 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 CCM2LQ9NUG4 571 aaPredicted RBP13.66□□□□□ -0.22
CHD8-211ENST00000556833 DNAJB12Q9NXW2 375 aaKnown RBP13.66□□□□□ -0.22
CHD8-211ENST00000556833 SPRR3Q9UBC9 169 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 KCNN3Q9UGI6 736 aa13.66□□□□□ -0.22
CHD8-211ENST00000556833 ABCA4P78363 2273 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 CXorf49A8MYA2 514 aaPredicted RBP13.65□□□□□ -0.22
CHD8-211ENST00000556833 BCKDKO14874 412 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 FGF17O60258 216 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 TGFB1P01137 390 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 RFPL3SP0C7P2 107 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 ENDOUP21128 410 aaKnown RBP13.65□□□□□ -0.22
CHD8-211ENST00000556833 CPN2P22792 545 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 SSR2P43308 183 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 FOXO1Q12778 655 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 CHIT1Q13231 466 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 CEBPEQ15744 281 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 PDK4Q16654 411 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 ADPRMQ3LIE5 342 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 C1orf185Q5T7R7 199 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 NDUFAF5Q5TEU4 345 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 ZBED8Q8IZ13 594 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 CLYBLQ8N0X4 340 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 MORN4Q8NDC4 146 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 ZNF721Q8TF20 911 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 ANKRD9Q96BM1 317 aaPredicted RBP13.65□□□□□ -0.22
CHD8-211ENST00000556833 PTCD3Q96EY7 689 aaKnown RBP13.65□□□□□ -0.22
CHD8-211ENST00000556833 GAL3ST4Q96RP7 486 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 RHOJQ9H4E5 214 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 COPS7AQ9UBW8 275 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 VTI1BQ9UEU0 232 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 L3MBTL1Q9Y468 752 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 ATG4BQ9Y4P1 393 aa13.65□□□□□ -0.22
CHD8-211ENST00000556833 ANKHD1Q8IWZ3 2542 aaKnown RBP13.65□□□□□ -0.22
CHD8-211ENST00000556833 ZNF469Q96JG9 3925 aaPredicted RBP13.64□□□□□ -0.23
CHD8-211ENST00000556833 TRGV5A0A0B4J1U4 118 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 KDM4EB2RXH2 506 aaPredicted RBP13.64□□□□□ -0.23
CHD8-211ENST00000556833 STK16O75716 305 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 SEC31AO94979 1220 aaKnown RBP13.64□□□□□ -0.23
CHD8-211ENST00000556833 IGHG3P01860 377 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 EPORP19235 508 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 ATP5A1P25705 553 aaKnown RBP13.64□□□□□ -0.23
CHD8-211ENST00000556833 UQCRC1P31930 480 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 KCNC1P48547 511 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 KCNJ2P63252 427 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 IRF8Q02556 426 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 TGM3Q08188 693 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 RCN2Q14257 317 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 SLC10A1Q14973 349 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 EFTUD2Q15029 972 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHD8-211ENST00000556833 WLSQ5T9L3 541 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 OPN5Q6U736 354 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 RGS9BPQ6ZS82 235 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 C9orf40Q8IXQ3 194 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 ACOT4Q8N9L9 421 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 FAM13CQ8NE31 585 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 DGAT2Q96PD7 388 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 KCNC2Q96PR1 638 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 KRT12Q99456 494 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 MS4A8Q9BY19 250 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 POLDIP3Q9BY77 421 aaKnown RBP13.64□□□□□ -0.23
CHD8-211ENST00000556833 DERL2Q9GZP9 239 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 OR51B5Q9H339 312 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 NT5DC2Q9H857 520 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 CNOT10Q9H9A5 744 aaKnown RBP13.64□□□□□ -0.23
CHD8-211ENST00000556833 GPRC5BQ9NZH0 403 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 RNF112Q9ULX5 631 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 PLEKHA6Q9Y2H5 1048 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 SNX24Q9Y343 169 aa13.64□□□□□ -0.23
CHD8-211ENST00000556833 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.64□□□□□ -0.23
CHD8-211ENST00000556833 MPDZO75970 2070 aa13.63□□□□□ -0.23
CHD8-211ENST00000556833 NIPBLQ6KC79 2804 aaeCLIP13.63□□□□□ -0.23
CHD8-211ENST00000556833 OR14I1A6ND48 311 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms