RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 RNF32Q9H0A6 362 aa9.9□□□□□ -0.82
MTHFD1-214ENST00000556771 C12orf65Q9H3J6 166 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-214ENST00000556771 RPF2Q9H7B2 306 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-214ENST00000556771 EML4Q9HC35 981 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-214ENST00000556771 NECTIN3Q9NQS3 549 aa9.9□□□□□ -0.82
MTHFD1-214ENST00000556771 VPS29Q9UBQ0 182 aa9.9□□□□□ -0.82
MTHFD1-214ENST00000556771 FBXW2Q9UKT8 454 aa9.9□□□□□ -0.82
MTHFD1-214ENST00000556771 NBEAQ8NFP9 2946 aa9.9□□□□□ -0.82
MTHFD1-214ENST00000556771 SCN2AQ99250 2005 aa9.9□□□□□ -0.82
MTHFD1-214ENST00000556771 IGHV3-20A0A0C4DH32 117 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 MASP2O00187 686 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 UBFD1O14562 309 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 SUV39H1O43463 412 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 PROM1O43490 865 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 DYRK3O43781 588 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 TMPRSS11DO60235 418 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 EEDO75530 441 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 CHEK2O96017 543 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 NR2F6P10588 404 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 UROSP10746 265 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 ITGAMP11215 1152 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 COX7A2P14406 83 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 ALDH3A1P30838 453 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 SOX11P35716 441 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 GSTM5P46439 218 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 HNRNPFP52597 415 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 HNRNPH2P55795 449 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 SLC26A5P58743 744 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 TRA2BP62995 288 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 IGLV3-21P80748 117 aaPredicted RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 TBL3Q12788 808 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 SPIN4Q56A73 249 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 CCNYL2Q5T2Q4 361 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 ABHD17BQ5VST6 288 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 H3F3CQ6NXT2 135 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 RNF165Q6ZSG1 346 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 COMMD6Q7Z4G1 85 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 ZNF605Q86T29 641 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 PTRH1Q86Y79 214 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 SHISA5Q8N114 240 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 SLC5A8Q8N695 610 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 B3GNT7Q8NFL0 401 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 BRIX1Q8TDN6 353 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 PSMF1Q92530 271 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 DAZLQ92904 295 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 PNPLA2Q96AD5 504 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 METTL2AQ96IZ6 378 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 ZNF354BQ96LW1 612 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 GATA5Q9BWX5 397 aaPredicted RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 SORBS1Q9BX66 1292 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 MRPL1Q9BYD6 325 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 CENPHQ9H3R5 247 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 KCNK13Q9HB14 408 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 FARSBQ9NSD9 589 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 ARGLU1Q9NWB6 273 aaPredicted RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 ABI3Q9P2A4 366 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 SLC17A7Q9P2U7 560 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 VTI1BQ9UEU0 232 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 PPIEQ9UNP9 301 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 ATG4BQ9Y4P1 393 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 ASB4Q9Y574 426 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 CLDN16Q9Y5I7 305 aa9.89□□□□□ -0.83
MTHFD1-214ENST00000556771 TNRC6AQ8NDV7 1962 aaKnown RBP9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 ATMQ13315 3056 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 DYTNA2CJ06 578 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 BIRC5O15392 142 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 SNUPNO95149 360 aaKnown RBP9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 ZWINTO95229 277 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 KLK1P06870 262 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 TPP2P29144 1249 aaPredicted RBP9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 ETV4P43268 484 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 MAPK12P53778 367 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 PLIN5Q00G26 463 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 ACSM2AQ08AH3 577 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 CASP8Q14790 479 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 IMPG1Q17R60 797 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 ACSM2BQ68CK6 577 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 OR52E8Q6IFG1 317 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 PRICKLE2Q7Z3G6 844 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 TRIM46Q7Z4K8 759 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 EXOC3L1Q86VI1 746 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 KIRREL3Q8IZU9 778 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 C1orf52Q8N6N3 182 aaKnown RBP9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 RBMXL3Q8N7X1 1067 aaKnown RBP9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 TMEM52Q8NDY8 209 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 OR14A16Q8NHC5 309 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 ELP5Q8TE02 316 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 CHTF18Q8WVB6 975 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 ART5Q96L15 291 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 FAIM2Q9BWQ8 316 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 ALOXE3Q9BYJ1 711 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 ACPTQ9BZG2 426 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 RRAGDQ9NQL2 400 aaPredicted RBP9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 PNO1Q9NRX1 252 aaKnown RBP9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 SIRT5Q9NXA8 310 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 PTGFRNQ9P2B2 879 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 B3GNT3Q9Y2A9 372 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 TIMM22Q9Y584 194 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 CLCA3PQ9Y6N3 262 aa9.88□□□□□ -0.83
MTHFD1-214ENST00000556771 CNTRLQ7Z7A1 2325 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms