RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 SYCE1Q8N0S2 351 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 RNF10Q8N5U6 811 aaKnown RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CPSF7Q8N684 471 aaKnown RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 LRRC52Q8N7C0 313 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CEP112Q8N8E3 955 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 TMEM35BQ8NCS4 154 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 DMBX1Q8NFW5 382 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ZNF564Q8TBZ8 553 aaPredicted RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CCDC107Q8WV48 283 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 SSMEM1Q8WWF3 244 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ZNF606Q8WXB4 792 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 SEPT8Q92599 483 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 MOB3AQ96BX8 217 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 OTUB1Q96FW1 271 aaPredicted RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 SGK494Q96LW2 274 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 RMDN2Q96LZ7 410 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 PCDHB18PQ96TA0 734 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 SDCBP2Q9H190 292 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 GOLPH3Q9H4A6 298 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 C11orf49Q9H6J7 331 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CYP3A43Q9HB55 503 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 SERINC1Q9NRX5 453 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ADAM22Q9P0K1 906 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 B3GAT1Q9P2W7 334 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 HMGXB4Q9UGU5 601 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ANAPC7Q9UJX3 599 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 NOCTQ9UK39 431 aaKnown RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 POMT1Q9Y6A1 747 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 SAR1BQ9Y6B6 198 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 C2orf16Q68DN1 1984 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 CHD5Q8TDI0 1954 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 DNAH12Q6ZR08 3092 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 ATP8B3O60423 1300 aa3.9□□□□□ -1.79
TRAV15-201ENST00000556680 NUP210Q8TEM1 1887 aaPredicted RBP3.9□□□□□ -1.79
TRAV15-201ENST00000556680 FEZF1A0PJY2 475 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 CTAGE15A4D2H0 777 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 NEMP2A6NFY4 417 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 TMEM221A6NGB7 291 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 I3L4J1 428 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 OR10H2O60403 315 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 CTSVO60911 334 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 IGHV2-70P01814 119 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 PAEPP09466 180 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 SMIM18P0DKX4 95 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 VDRP11473 427 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 GZMAP12544 262 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 CCDC130P13994 396 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 KCNE1P15382 129 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 DESP17661 470 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 CYP3A5P20815 502 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 DGKAP23743 735 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 ACAT1P24752 427 aaKnown RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 PSMA3P25788 255 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 PTPN3P26045 913 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 EPHA2P29317 976 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 CDC25CP30307 473 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 SLC6A6P31641 620 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 TNNT3P45378 269 aaPredicted RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 BRCC3P46736 316 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 RGS7P49802 495 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 PITX1P78337 314 aaPredicted RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 POU3F1Q03052 451 aaPredicted RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 C2orf54Q08AI8 447 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 DMPKQ09013 629 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 RPS6KA1Q15418 735 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 PKN2Q16513 984 aaKnown RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 OR6B2Q6IFH4 312 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 CAPRIN2Q6IMN6 1127 aaKnown RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 PRR27Q6MZM9 219 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 C11orf63Q6NUN7 778 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 DCUN1D2Q6PH85 259 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 CORO6Q6QEF8 472 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 ZNF517Q6ZMY9 492 aaPredicted RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 SLC24A5Q71RS6 500 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 ARHGAP22Q7Z5H3 698 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 TMPRSS11BQ86T26 416 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 RBM23Q86U06 439 aaKnown RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 RPAINQ86UA6 219 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 CTAGE6Q86UF2 777 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 CCDC50Q8IVM0 306 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 MCOLN2Q8IZK6 566 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 NAGSQ8N159 534 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 THEM5Q8N1Q8 247 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 UBL4BQ8N7F7 174 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 DBF4BQ8NFT6 615 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 UBA3Q8TBC4 463 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 FAM162AQ96A26 154 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 THOC1Q96FV9 657 aaKnown RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 SENP8Q96LD8 212 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 ZNF583Q96ND8 569 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 LRRC3BQ96PB8 259 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 TSPAN18Q96SJ8 248 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 CPNE1Q99829 537 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 MRPL45Q9BRJ2 306 aaKnown RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 KATNB1Q9BVA0 655 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 GTPBP2Q9BX10 602 aaKnown RBP3.89□□□□□ -1.79
TRAV15-201ENST00000556680 FTHL17Q9BXU8 183 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 VN1R1Q9GZP7 353 aa3.89□□□□□ -1.79
TRAV15-201ENST00000556680 ELOVL4Q9GZR5 314 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms