RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 CXorf51AA0A1B0GTR3 108 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 A0A1B0GVM2 712 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 A0A1W2PPM1 405 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 ZNF840PA6NDX5 716 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 CCT8L1PA6NM43 557 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 HNRNPCL2B2RXH8 293 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 PFDN6O15212 129 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 HS6ST1O60243 411 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 PRAMEF11O60813 436 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 EDF1O60869 148 aaKnown RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 MTRF1O75570 445 aaKnown RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 JTBO76095 146 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 PAPSS2O95340 614 aaPredicted RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 FGBP02675 491 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 C1QAP02745 245 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 FGF1P05230 155 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 SERPINF2P08697 491 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 NHLRC4P0CG21 123 aaPredicted RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 HGFP14210 728 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 CSF2RAP15509 400 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 CREB1P16220 341 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 ATF6P18850 670 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 TAC1P20366 129 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 ACHEP22303 614 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 MYF6P23409 242 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 CD27P26842 260 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 TYK2P29597 1187 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 CDC25CP30307 473 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 CTNNB1P35222 781 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 RPA3P35244 121 aaPredicted RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 PTGER3P43115 390 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 SERPINB8P50452 374 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 RASSF2P50749 326 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 METAP1P53582 386 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 LIMK2P53671 638 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 RPL15P61313 204 aaKnown RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 WDR5P61964 334 aaKnown RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 RELQ04864 619 aaPredicted RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 ASPHQ12797 758 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 IL24Q13007 206 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 ZNF177Q13360 481 aaPredicted RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 ZNF235Q14590 738 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 EFTUD2Q15029 972 aaKnown RBP eCLIP4.91□□□□□ -1.62
SRP54-211ENST00000556445 PTCHD3Q3KNS1 767 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 LACTB2Q53H82 288 aaPredicted RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 RUNDC3AQ59EK9 446 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 TMEM196Q5HYL7 178 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 C6orf136Q5SQH8 315 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 SPATA46Q5T0L3 261 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 PSRC1Q6PGN9 363 aaPredicted RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 AFTPHQ6ULP2 937 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 C6orf89Q6UWU4 347 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 RANBP10Q6VN20 620 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 ZNF782Q6ZMW2 699 aaPredicted RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.91□□□□□ -1.62
SRP54-211ENST00000556445 CFAP77Q6ZQR2 320 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 TRPM8Q7Z2W7 1104 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 KCNMB4Q86W47 210 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 SLC15A3Q8IY34 581 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 KIRREL3Q8IZU9 778 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 LGI2Q8N0V4 545 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 CLYBLQ8N0X4 340 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 ZNF557Q8N988 423 aaPredicted RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 RP9Q8TA86 221 aaKnown RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 DNAJB14Q8TBM8 379 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 GANCQ8TET4 914 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 CNOT9Q92600 299 aaKnown RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 MRPS31Q92665 395 aaKnown RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 PPP2R3CQ969Q6 453 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 PSMG2Q969U7 264 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 ELMOD3Q96FG2 381 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 IMP4Q96G21 291 aaKnown RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 OXNAD1Q96HP4 312 aaPredicted RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 OR2A14Q96R47 310 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 RBBP8Q99708 897 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 NPAS1Q99742 590 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 EGFL8Q99944 293 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 SEMA3CQ99985 751 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 SLC39A3Q9BRY0 314 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 FICDQ9BVA6 458 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 POLR1EQ9GZS1 481 aaKnown RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 GORASP2Q9H8Y8 452 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 FANCEQ9HB96 536 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 TRPC7Q9HCX4 862 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 NT5MQ9NPB1 228 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 FGFR1OP2Q9NVK5 253 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 HAO2Q9NYQ3 351 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 ANKMY1Q9P2S6 941 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 PEMTQ9UBM1 199 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 PLAGL1Q9UM63 463 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 SNX10Q9Y5X0 201 aa4.91□□□□□ -1.62
SRP54-211ENST00000556445 GOLGB1Q14789 3259 aaKnown RBP4.91□□□□□ -1.62
SRP54-211ENST00000556445 MIA3Q5JRA6 1907 aa4.9□□□□□ -1.62
SRP54-211ENST00000556445 ZCWPW2A0A1B0GU75 182 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 DNAJC9-AS1A6NH13 148 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 FOXO6A8MYZ6 492 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 H0YHG0 523 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 SOCS6O14544 535 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 NKX2-8O15522 239 aa4.9□□□□□ -1.63
SRP54-211ENST00000556445 COCHO43405 550 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms