RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 HAUS5O94927 633 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 SMIM10L1P0DMW3 83 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 TPSB2P20231 275 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 CPA2P48052 419 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 VPS41P49754 854 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 ASPHQ12797 758 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 CBLBQ13191 982 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 TPSAB1Q15661 275 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 PAQR3Q6TCH7 311 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 CAPN12Q6ZSI9 719 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 GPATCH11Q8N954 259 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 SLC22A8Q8TCC7 542 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 SLC2A12Q8TD20 617 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 PTPMT1Q8WUK0 201 aaPredicted RBP12.82□□□□□ -0.36
ACTN1-219ENST00000556432 PIGTQ969N2 578 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 FBXL8Q96CD0 374 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 PERPQ96FX8 193 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 SMIM10Q96HG1 83 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 TRIB1Q96RU8 372 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 ALOXE3Q9BYJ1 711 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 TAS2R13Q9NYV9 303 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 CAMK2AQ9UQM7 478 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 CLDN16Q9Y5I7 305 aa12.82□□□□□ -0.36
ACTN1-219ENST00000556432 SH3D21A4FU49 640 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 ERN1O75460 977 aaKnown RBP12.81□□□□□ -0.36
ACTN1-219ENST00000556432 TRAPPC6AO75865 159 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 LRATO95237 230 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 BMP7P18075 431 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 CTSSP25774 331 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 OPRM1P35372 400 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 PLA2G16P53816 162 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 AP1S2P56377 157 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 KIF5AQ12840 1032 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 DUSP8Q13202 625 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 RCN2Q14257 317 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 SF3B4Q15427 424 aaKnown RBP eCLIP12.81□□□□□ -0.36
ACTN1-219ENST00000556432 TRIP13Q15645 432 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-219ENST00000556432 NXPE4Q6UWF7 544 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.81□□□□□ -0.36
ACTN1-219ENST00000556432 KLHDC8AQ8IYD2 350 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 PM20D2Q8IYS1 436 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 LRRC75A-AS1Q8N1F1 130 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 LRRC25Q8N386 305 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-219ENST00000556432 OR8K3Q8NH51 312 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 GABPB2Q8TAK5 448 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-219ENST00000556432 DACH2Q96NX9 599 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 CSF3RQ99062 836 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 RBM24Q9BX46 236 aaKnown RBP12.81□□□□□ -0.36
ACTN1-219ENST00000556432 NPLQ9BXD5 320 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-219ENST00000556432 TRIM5Q9C035 493 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 AICDAQ9GZX7 198 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 COPS7BQ9H9Q2 264 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-219ENST00000556432 PRM3Q9NNZ6 103 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 ACKR4Q9NPB9 350 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 MXRA5Q9NR99 2828 aa12.81□□□□□ -0.36
ACTN1-219ENST00000556432 LRRC3CA6NJW4 275 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 C8BP07358 591 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 CERS1P27544 350 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 HNRNPH1P31943 449 aaKnown RBP12.8□□□□□ -0.36
ACTN1-219ENST00000556432 ID2Q02363 134 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 TBL3Q12788 808 aaKnown RBP12.8□□□□□ -0.36
ACTN1-219ENST00000556432 EFTUD2Q15029 972 aaKnown RBP eCLIP12.8□□□□□ -0.361e-7■■■□□ 14.8
ACTN1-219ENST00000556432 CCNG2Q16589 344 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 HSP90AA5PQ58FG0 334 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 NSUN5P2Q63ZY6 315 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 POMZP3Q6PJE2 187 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 RAD9BQ6WBX8 426 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 LUZP2Q86TE4 346 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 THOC6Q86W42 341 aaKnown RBP12.8□□□□□ -0.36
ACTN1-219ENST00000556432 RASGEF1CQ8N431 466 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 SMPDL3BQ92485 455 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 SPACA9Q96E40 222 aaPredicted RBP12.8□□□□□ -0.36
ACTN1-219ENST00000556432 TIMP4Q99727 224 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 CCL19Q99731 98 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 FAM167BQ9BTA0 163 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 DOHHQ9BU89 302 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 UBTD1Q9HAC8 227 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 IARS2Q9NSE4 1012 aaKnown RBP12.8□□□□□ -0.36
ACTN1-219ENST00000556432 QPCTLQ9NXS2 382 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 VTI1BQ9UEU0 232 aa12.8□□□□□ -0.36
ACTN1-219ENST00000556432 SONP18583 2426 aaKnown RBP12.79□□□□□ -0.36
ACTN1-219ENST00000556432 ZCWPW2A0A1B0GU75 182 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 MAGEB16A2A368 324 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 SDR42E2A6NKP2 422 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 GOLGA8MH3BSY2 632 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 CTNSO60931 367 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 H2AFYO75367 372 aaKnown RBP12.79□□□□□ -0.36
ACTN1-219ENST00000556432 COX7A2P14406 83 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 MSH2P43246 934 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 KCNJ1P48048 391 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 CDKN2DP55273 166 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 LIM2P55344 173 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 IL2P60568 153 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 CRYZQ08257 329 aaKnown RBP12.79□□□□□ -0.36
ACTN1-219ENST00000556432 PDAP1Q13442 181 aaKnown RBP12.79□□□□□ -0.36
ACTN1-219ENST00000556432 TOMM20Q15388 145 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 MPEG1Q2M385 716 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 ZNF791Q3KP31 576 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-219ENST00000556432 PIGGQ5H8A4 983 aa12.79□□□□□ -0.36
ACTN1-219ENST00000556432 ARMC3Q5W041 872 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms