RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CHTF18Q8WVB6 975 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 SELENOMQ8WWX9 145 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 METTL21AQ8WXB1 218 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 TLCD1Q96CP7 247 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 C11orf24Q96F05 449 aaPredicted RBP9.05□□□□□ -0.96
SRP54-210ENST00000556380 VPS50Q96JG6 964 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 CNDP1Q96KN2 507 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 PTCHD1Q96NR3 888 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 KCNA7Q96RP8 456 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 TRMOQ9BU70 441 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 TUBB6Q9BUF5 446 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 MECRQ9BV79 373 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 LHPPQ9H008 270 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 TMBIM4Q9HC24 238 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 MID1IP1Q9NPA3 183 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 ZNF71Q9NQZ8 489 aaPredicted RBP9.05□□□□□ -0.96
SRP54-210ENST00000556380 C19orf25Q9UFG5 118 aaPredicted RBP9.05□□□□□ -0.96
SRP54-210ENST00000556380 ADAM29Q9UKF5 820 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 TP53TG5Q9Y2B4 290 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 ATG4BQ9Y4P1 393 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 TIMM22Q9Y584 194 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 PCDHGB7Q9Y5F8 929 aa9.05□□□□□ -0.96
SRP54-210ENST00000556380 NSG1A0A0A6YYJ2 146 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 A0A1W2PR48 441 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 H3BQF6 201 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 NPHS1O60500 1241 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 SEC24DO94855 1032 aaPredicted RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 FGF4P08620 206 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 PRR35P0CG20 571 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 HSD3B1P14060 373 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 HSD3B2P26439 372 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 TPP2P29144 1249 aaPredicted RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 SERPINB3P29508 390 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 SOX11P35716 441 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 SERPINB4P48594 390 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 RNF144AP50876 292 aaPredicted RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 GPR143P51810 404 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 RAP1GDS1P52306 607 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 IGLV3-21P80748 117 aaPredicted RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 RCN2Q14257 317 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 UGT3A2Q3SY77 523 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 LACTB2Q53H82 288 aaPredicted RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 MFSD4BQ5TF39 518 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 C18orf63Q68DL7 685 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 IGFL2Q6UWQ7 119 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 IGFL3Q6UXB1 125 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 PRICKLE2Q7Z3G6 844 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 COMMD6Q7Z4G1 85 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 GPR180Q86V85 440 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 KBTBD2Q8IY47 623 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 GBP7Q8N8V2 638 aaPredicted RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 FAM47BQ8NA70 645 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 NFAM1Q8NET5 270 aaPredicted RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 UCN3Q969E3 161 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 ANKRD9Q96BM1 317 aaPredicted RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 HBEGFQ99075 208 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 CENPKQ9BS16 269 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 MRPL1Q9BYD6 325 aaKnown RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 ACPTQ9BZG2 426 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 IQCGQ9H095 443 aaKnown RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 CENPHQ9H3R5 247 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 COPS7BQ9H9Q2 264 aaPredicted RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 ZBTB20Q9HC78 741 aaPredicted RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 PRTFDC1Q9NRG1 225 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 RIC8BQ9NVN3 520 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 SIRT5Q9NXA8 310 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 GPR83Q9NYM4 423 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 AHSPQ9NZD4 102 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 C5AR2Q9P296 337 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 VPS29Q9UBQ0 182 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 FBXW2Q9UKT8 454 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 PPIEQ9UNP9 301 aaKnown RBP9.04□□□□□ -0.96
SRP54-210ENST00000556380 SLC12A4Q9UP95 1085 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 CCL27Q9Y4X3 112 aa9.04□□□□□ -0.96
SRP54-210ENST00000556380 SPENQ96T58 3664 aaKnown RBP9.03□□□□□ -0.96
SRP54-210ENST00000556380 BLACEA4D250 179 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 WASHC1A8K0Z3 465 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 CLDN4O14493 209 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 TM9SF1O15321 606 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 BIRC5O15392 142 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 GBAP04062 536 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 KLK1P06870 262 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 CHRNGP07510 517 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 FAM58BPP0C7Q3 252 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 MYZAPP0CAP1 466 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 UROSP10746 265 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 ITGAMP11215 1152 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 ICAM2P13598 275 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 CPN2P22792 545 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 ITGA3P26006 1051 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 PPP2R1BP30154 601 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 HMOX2P30519 316 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 PGDP52209 483 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 SLC18A1P54219 525 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 OR4D2P58180 307 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 RAE1P78406 368 aaKnown RBP9.03□□□□□ -0.96
SRP54-210ENST00000556380 TNFRSF17Q02223 184 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 ASPHQ12797 758 aa9.03□□□□□ -0.96
SRP54-210ENST00000556380 CSTF3Q12996 717 aaKnown RBP9.03□□□□□ -0.96
SRP54-210ENST00000556380 RAPSNQ13702 412 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms