RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 OR5M9Q8NGP3 310 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 C8orf46Q8TAG6 207 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 SMPDL3AQ92484 453 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 GGHQ92820 318 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 C5orf30Q96GV9 206 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 ATP6V0BQ99437 205 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 MRPL9Q9BYD2 267 aaKnown RBP2.39□□□□□ -2.03
SCFD1-218ENST00000556256 PARLQ9H300 379 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 HEXA-AS1Q9H8Q6 139 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 AKIRIN1Q9H9L7 192 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-218ENST00000556256 TMOD3Q9NYL9 352 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 DBF4Q9UBU7 674 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-218ENST00000556256 MAD2L2Q9UI95 211 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 PSORS1C1Q9UIG5 152 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 PILRAQ9UKJ1 303 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 FBXW2Q9UKT8 454 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 MRPS18CQ9Y3D5 142 aaKnown RBP2.39□□□□□ -2.03
SCFD1-218ENST00000556256 MYH14Q7Z406 1995 aaKnown RBP2.39□□□□□ -2.03
SCFD1-218ENST00000556256 RNF123Q5XPI4 1314 aa2.39□□□□□ -2.03
SCFD1-218ENST00000556256 IGHV3-38A0A0C4DH36 116 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 CCDC162PA2VCL2 907 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 ZNF840PA6NDX5 716 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 SLC15A5A6NIM6 579 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 CACNB4O00305 520 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-218ENST00000556256 SIGLEC5O15389 551 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 SYT7O43581 403 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 BAG2O95816 211 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 THEGLP0DJG4 465 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 CYP3A5P20815 502 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 GPR183P32249 361 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 CTNNB1P35222 781 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 TNFSF10P50591 281 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 BACE1P56817 501 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 EVCP57679 992 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 TEFQ10587 303 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 RPA4Q13156 261 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 MTHFSDQ2M296 383 aaKnown RBP2.38□□□□□ -2.03
SCFD1-218ENST00000556256 CD164L2Q6UWJ8 174 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 TMEM126BQ8IUX1 230 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 ZNF444Q8N0Y2 327 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-218ENST00000556256 SLC43A2Q8N370 569 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 SIDT2Q8NBJ9 832 aaKnown RBP2.38□□□□□ -2.03
SCFD1-218ENST00000556256 CLEC1AQ8NC01 280 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 OR9Q2Q8NGE9 314 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 OR10G7Q8NGN6 311 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 OR13C5Q8NGS8 318 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 RPLP0P6Q8NHW5 317 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 FAM46BQ96A09 425 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 B3GALT6Q96L58 329 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 GUCD1Q96NT3 240 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 PRAM1Q96QH2 718 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 SSX3Q99909 188 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 DDX50Q9BQ39 737 aaKnown RBP2.38□□□□□ -2.03
SCFD1-218ENST00000556256 LRRC2Q9BYS8 371 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 NAPBQ9H115 298 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 VIPAS39Q9H9C1 493 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 PRMT8Q9NR22 394 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-218ENST00000556256 CYP39A1Q9NYL5 469 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 APPL1Q9UKG1 709 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 ITM2BQ9Y287 266 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 ETV7Q9Y603 341 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 TEX264Q9Y6I9 313 aa2.38□□□□□ -2.03
SCFD1-218ENST00000556256 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-218ENST00000556256 A8MU76 341 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 SHISA9B4DS77 424 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 DDX39AO00148 427 aaKnown RBP2.37□□□□□ -2.03
SCFD1-218ENST00000556256 CHUKO15111 745 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 TNFSF12O43508 249 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 VEGFDO43915 354 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 SNAP91O60641 907 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 CSDE1O75534 798 aaKnown RBP2.37□□□□□ -2.03
SCFD1-218ENST00000556256 MTRF1O75570 445 aaKnown RBP2.37□□□□□ -2.03
SCFD1-218ENST00000556256 PNPP00491 289 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 RPLP0P05388 317 aaKnown RBP2.37□□□□□ -2.03
SCFD1-218ENST00000556256 NUDT17P0C025 328 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 SBK2P0C263 348 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 SKILP12757 684 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 ANPEPP15144 967 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 GIFP27352 417 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 PDHA2P29803 388 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 NDST2P52849 883 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 ABCE1P61221 599 aaKnown RBP2.37□□□□□ -2.03
SCFD1-218ENST00000556256 DHODHQ02127 395 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 GABPAQ06546 454 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 NPRL3Q12980 569 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 ZNF177Q13360 481 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-218ENST00000556256 PDE7AQ13946 482 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 GK2Q14410 553 aaPredicted RBP2.37□□□□□ -2.03
SCFD1-218ENST00000556256 MEF2DQ14814 521 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 SPHARQ15513 63 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 FAM189A2Q15884 450 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 TEX35Q5T0J7 233 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 GDPGP1Q6ZNW5 385 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 CHMP1BQ7LBR1 199 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 ZNF410Q86VK4 478 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 CARM1Q86X55 608 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 ZFAND4Q86XD8 727 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 CACUL1Q86Y37 369 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 SERPINA12Q8IW75 414 aa2.37□□□□□ -2.03
SCFD1-218ENST00000556256 OR4N5Q8IXE1 308 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms