RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 STON2Q8WXE9 905 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 THAP4Q8WY91 577 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 TM4SF18Q96CE8 201 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 C11orf24Q96F05 449 aaPredicted RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 CHMP6Q96FZ7 201 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 FCRL1Q96LA6 429 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 C3orf30Q96M34 536 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 RILPQ96NA2 401 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 PRPF18Q99633 342 aaKnown RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 PELOQ9BRX2 385 aaKnown RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 CCDC28BQ9BUN5 200 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 EBPLQ9BY08 206 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 RBCK1Q9BYM8 510 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 VN1R1Q9GZP7 353 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 AKTIPQ9H8T0 292 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 NPHS2Q9NP85 383 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 MYNNQ9NPC7 610 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 TCF7L2Q9NQB0 619 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 MIEF1Q9NQG6 463 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 MRGBPQ9NV56 204 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 FGFR1OP2Q9NVK5 253 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 EHD3Q9NZN3 535 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 IL17BQ9UHF5 180 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 TRIM33Q9UPN9 1127 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 DLGAP4Q9Y2H0 992 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 RAXQ9Y2V3 346 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 ATG4BQ9Y4P1 393 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 POLR3HQ9Y535 204 aaPredicted RBP7.19□□□□□ -1.26
TDP1-214ENST00000556063 ASB4Q9Y574 426 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 PCDHA9Q9Y5H5 950 aa7.19□□□□□ -1.26
TDP1-214ENST00000556063 A0A087WV48 116 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 GOLGA8QA0A0J9YX86 632 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 CDC14CA4D256 554 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 GOLGA8OA6NCC3 632 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 GMNCA6NCL1 334 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 FAM227AF5H4B4 570 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 GOLGA8NF8WBI6 632 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 EFSO43281 561 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 CNOT3O75175 753 aaKnown RBP7.18□□□□□ -1.26
TDP1-214ENST00000556063 DNAJB6O75190 326 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 JRKO75564 520 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 CDC123O75794 336 aaPredicted RBP7.18□□□□□ -1.26
TDP1-214ENST00000556063 GPR75O95800 540 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 CAPNS1P04632 268 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 IL3P08700 152 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 PRR35P0CG20 571 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 BCKDHAP12694 445 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 COX7A2P14406 83 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 IDO1P14902 403 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 SDC1P18827 310 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 PRPS1L1P21108 318 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 F8A1P23610 371 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 PIK3R1P27986 724 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 EPHA3P29320 983 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 LSP1P33241 339 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 RRADP55042 308 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 TMPRSS3P57727 454 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 STX1BP61266 288 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 RPS18P62269 152 aaKnown RBP7.18□□□□□ -1.26
TDP1-214ENST00000556063 AP2B1P63010 937 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 GNGT1P63211 74 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 RAE1P78406 368 aaKnown RBP7.18□□□□□ -1.26
TDP1-214ENST00000556063 PLIN5Q00G26 463 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 ERV3-1Q14264 604 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 UGT8Q16880 541 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 C6orf163Q5TEZ5 329 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 C18orf63Q68DL7 685 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 LARP4Q71RC2 724 aaKnown RBP eCLIP7.18□□□□□ -1.26
TDP1-214ENST00000556063 MTERF4Q7Z6M4 381 aaKnown RBP7.18□□□□□ -1.26
TDP1-214ENST00000556063 CPLX4Q7Z7G2 160 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 LAPTM4BQ86VI4 370 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 LIX1Q8N485 282 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 OR4K14Q8NGD5 310 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 MTERF3Q96E29 417 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 RBM18Q96H35 190 aaKnown RBP7.18□□□□□ -1.26
TDP1-214ENST00000556063 MAELQ96JY0 434 aaKnown RBP7.18□□□□□ -1.26
TDP1-214ENST00000556063 FER1L6-AS2Q96M78 137 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 CATSPER2Q96P56 530 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 CSF3RQ99062 836 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 LPAR4Q99677 370 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 C1orf50Q9BV19 199 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 KRTAP3-3Q9BYR6 98 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 KRTAP3-2Q9BYR7 98 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 WDR55Q9H6Y2 383 aaPredicted RBP7.18□□□□□ -1.26
TDP1-214ENST00000556063 LANCL2Q9NS86 450 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 ATAD3AQ9NVI7 634 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 ASIC5Q9NY37 505 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 FAM53CQ9NYF3 392 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 DCTN4Q9UJW0 460 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 ENTPD4Q9Y227 616 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 POLHQ9Y253 713 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 ZNF780BQ9Y6R6 833 aa7.18□□□□□ -1.26
TDP1-214ENST00000556063 ANKRD11Q6UB99 2663 aaPredicted RBP7.18□□□□□ -1.26
TDP1-214ENST00000556063 MAP1BP46821 2468 aaKnown RBP7.18□□□□□ -1.26
TDP1-214ENST00000556063 NUP210LQ5VU65 1888 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 NUP214P35658 2090 aaPredicted RBP7.17□□□□□ -1.26
TDP1-214ENST00000556063 A0A0G2JND7 137 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 GLOD5A6NK44 160 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 ZNF195O14628 629 aa7.17□□□□□ -1.26
TDP1-214ENST00000556063 SNPHO15079 494 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms