RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 SLC13A3Q8WWT9 602 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 PYDC1Q8WXC3 89 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 ZUFSPQ96AP4 578 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 SCARF2Q96GP6 870 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 APIPQ96GX9 242 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 ITCHQ96J02 903 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 TEX37Q96LM6 180 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 APOLD1Q96LR9 279 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 C12orf66Q96MD2 445 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 OR2M4Q96R27 311 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 OR52E6Q96RD3 313 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 MTERF1Q99551 399 aaKnown RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 PRPF18Q99633 342 aaKnown RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 AIF1LQ9BQI0 150 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 TACO1Q9BSH4 297 aaKnown RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 EFHD1Q9BUP0 239 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 PITHD1Q9GZP4 211 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 PRDM14Q9GZV8 571 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 ACTL8Q9H568 366 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 MVB12BQ9H7P6 319 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 EBF2Q9HAK2 575 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 PELI2Q9HAT8 420 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 TM7SF3Q9NS93 570 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 AHSPQ9NZD4 102 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 C6orf203Q9P0P8 240 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 ABCD2Q9UBJ2 740 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 CD300AQ9UGN4 299 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 SUFUQ9UMX1 484 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 GPR55Q9Y2T6 319 aaPredicted RBP6.51□□□□□ -1.37
SLIRP-204ENST00000555890 C15orf41Q9Y2V0 281 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 TSC22D4Q9Y3Q8 395 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 HS3ST3A1Q9Y663 406 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 COLEC10Q9Y6Z7 277 aa6.51□□□□□ -1.37
SLIRP-204ENST00000555890 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PRSS38A1L453 326 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PIPSLA2A3N6 862 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 ASPDHA6ND91 283 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PRORSD1PA6NEY8 169 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PDZK1P1A8MUH7 402 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 MAGEB17A8MXT2 336 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PRAMEF26H0Y7S4 382 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 NME4O00746 187 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 ERN1O75460 977 aaKnown RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 CLDN1O95832 211 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 ANXA4P09525 319 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 ERGP11308 486 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 SDC1P18827 310 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PRPS1L1P21108 318 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PTX3P26022 381 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 RPL10P27635 214 aaKnown RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 ACSL1P33121 698 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 CSTF2P33240 577 aaKnown RBP eCLIP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 MSX2P35548 267 aaPredicted RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 HPCAL1P37235 193 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 RPL3P39023 403 aaKnown RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PIK3CBP42338 1070 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 ERFP50548 548 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 RAB28P51157 221 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 CCR8P51685 355 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 HNRNPFP52597 415 aaKnown RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 DGKQP52824 942 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 LIPEQ05469 1076 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 CAPRIN1Q14444 709 aaKnown RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 TAF11Q15544 211 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 DUOXA1Q1HG43 343 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PRSS53Q2L4Q9 553 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PGS1Q32NB8 556 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 FAM174BQ3ZCQ3 159 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 PAGE3Q5JUK9 113 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 C6orf10Q5SRN2 563 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 CATSPEREQ5SY80 951 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 WLSQ5T9L3 541 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 KIAA0895LQ68EN5 471 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 ANO7Q6IWH7 933 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 NANOGP8Q6NSW7 305 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 SUSD1Q6UWL2 747 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 DBX2Q6ZNG2 339 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 CDH24Q86UP0 819 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 GPR180Q86V85 440 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 TMEM126BQ8IUX1 230 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 SVOPQ8N4V2 548 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 TBC1D19Q8N5T2 526 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 VPS37AQ8NEZ2 397 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 TSTD1Q8NFU3 115 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 TNIP2Q8NFZ5 429 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 OR8J3Q8NGG0 315 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 HUS1BQ8NHY5 278 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 DNAJB14Q8TBM8 379 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 CHTF18Q8WVB6 975 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 DNAJC9Q8WXX5 260 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 TMEM125Q96AQ2 219 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 TESCQ96BS2 214 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 NAF1Q96HR8 494 aaKnown RBP6.5□□□□□ -1.37
SLIRP-204ENST00000555890 FCRL1Q96LA6 429 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 IL17FQ96PD4 163 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 TSSK3Q96PN8 268 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 MYOCQ99972 504 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 SLC39A3Q9BRY0 314 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 NT5DC2Q9H857 520 aa6.5□□□□□ -1.37
SLIRP-204ENST00000555890 NANOGQ9H9S0 305 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms