RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 SLC2A12Q8TD20 617 aa11.79□□□□□ -0.52
HNRNPC-221ENST00000555883 ASB15Q8WXK1 588 aa11.79□□□□□ -0.52
HNRNPC-221ENST00000555883 MAPKAP1Q9BPZ7 522 aa11.79□□□□□ -0.52
HNRNPC-221ENST00000555883 SPOCK3Q9BQ16 436 aa11.79□□□□□ -0.52
HNRNPC-221ENST00000555883 CENPKQ9BS16 269 aa11.79□□□□□ -0.52
HNRNPC-221ENST00000555883 TRIM8Q9BZR9 551 aa11.79□□□□□ -0.52
HNRNPC-221ENST00000555883 ZDHHC11Q9H8X9 412 aa11.79□□□□□ -0.52
HNRNPC-221ENST00000555883 COPS7AQ9UBW8 275 aa11.79□□□□□ -0.52
HNRNPC-221ENST00000555883 PPT2Q9UMR5 302 aa11.79□□□□□ -0.52
HNRNPC-221ENST00000555883 ERVK-11Q9UQG0 969 aa11.79□□□□□ -0.52
HNRNPC-221ENST00000555883 PCDHGA11Q9Y5H2 935 aa11.79□□□□□ -0.52
HNRNPC-221ENST00000555883 MYO7BQ6PIF6 2116 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 A0A1B0GTH9 108 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 C17orf105B2RV13 164 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 SUPT3HB4E1H0 165 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 H0YIV9 168 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 UBXN8O00124 270 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 ACOT7O00154 380 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 HS6ST1O60243 411 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 SUPT3HO75486 399 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 FAM155BO75949 473 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 COX7A2P14406 83 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 ELAVL4P26378 380 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 SSR2P43308 183 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 PIK3CGP48736 1102 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 HK2P52789 917 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 ALDH18A1P54886 795 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 RNF4P78317 190 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 TBL3Q12788 808 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 SETDB1Q15047 1291 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 HYAL4Q2M3T9 481 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 NDUFAF5Q5TEU4 345 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 TMEM211Q6ICI0 200 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 OR4C11Q6IEV9 310 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 OPN5Q6U736 354 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 RTL4Q6ZR62 310 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 GK5Q6ZS86 529 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 CCDC25Q86WR0 208 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 RELL1Q8IUW5 271 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 SRRM1Q8IYB3 904 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 DND1Q8IYX4 353 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 OR2M7Q8NG81 312 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 NUBPLQ8TB37 319 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 TANKQ92844 425 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 ANKRD9Q96BM1 317 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 REPS1Q96D71 796 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 ART5Q96L15 291 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 TREX2Q9BQ50 279 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 ENKD1Q9H0I2 346 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 TP63Q9H3D4 680 aaPredicted RBP11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 DEPPQ9NTK1 212 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 COQ3Q9NZJ6 369 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 PHF11Q9UIL8 331 aa11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 TNPO3Q9Y5L0 923 aaKnown RBP11.78□□□□□ -0.52
HNRNPC-221ENST00000555883 HMX2A2RU54 273 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 OR14I1A6ND48 311 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 DYRK3O43781 588 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 LDB3O75112 727 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 GLSO94925 669 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 OR6B1O95007 311 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 TGFB1P01137 390 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 IGKV3-11P04433 115 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 C2P06681 752 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 PCNAP12004 261 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 CNR1P21554 472 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 CPN2P22792 545 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 PTX3P26022 381 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 SSTR2P30874 369 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 TLX1P31314 330 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 SOX3P41225 446 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 STT3AP46977 705 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 GPR85P60893 370 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 PHEXP78562 749 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 PLIN5Q00G26 463 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 CUL3Q13618 768 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 PCBP2Q15366 365 aaKnown RBP eCLIP11.77□□□□□ -0.532e-70■■■□□ 16.7
HNRNPC-221ENST00000555883 C10orf62Q5T681 223 aaPredicted RBP11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 IL20RBQ6UXL0 311 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 CEP128Q6ZU80 1094 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 GPR180Q86V85 440 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 SLC22A16Q86VW1 577 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 SLC15A4Q8N697 577 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 HUS1BQ8NHY5 278 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 ZNF721Q8TF20 911 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 EXT2Q93063 718 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 RGMAQ96B86 450 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 NXNL1Q96CM4 212 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 C14orf79Q96F83 325 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 FAM173AQ9BQD7 235 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 PELOQ9BRX2 385 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 FUT8Q9BYC5 575 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 OR8D2Q9GZM6 311 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 RPF2Q9H7B2 306 aaKnown RBP11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 DMRT3Q9NQL9 472 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 ZDHHC18Q9NUE0 388 aa11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.77□□□□□ -0.53
HNRNPC-221ENST00000555883 A0A1B0GVC2 190 aa11.76□□□□□ -0.53
HNRNPC-221ENST00000555883 WWP2O00308 870 aa11.76□□□□□ -0.53
HNRNPC-221ENST00000555883 FOXE1O00358 373 aaPredicted RBP11.76□□□□□ -0.53
HNRNPC-221ENST00000555883 RTCAO00442 366 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms