RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 HOXB3P14651 431 aaPredicted RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 PCSK6P29122 969 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 SOX11P35716 441 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 CAPZBP47756 277 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 PNLIPRP1P54315 467 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 GABARAPL2P60520 117 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 GPLD1P80108 840 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 DCTN2Q13561 401 aaKnown RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 ZXDCQ2QGD7 858 aaPredicted RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 NOXRED1Q6NXP6 359 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 ENPP6Q6UWR7 440 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 CLVS1Q8IUQ0 354 aaPredicted RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 FBXO15Q8NCQ5 510 aaPredicted RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 LCN9Q8WX39 176 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 MTFMTQ96DP5 389 aaKnown RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 MAGED4Q96JG8 741 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 MUS81Q96NY9 551 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 ING2Q9H160 280 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 FAM120CQ9NX05 1096 aaKnown RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 RUVBL1Q9Y265 456 aaKnown RBP16.53■□□□□ 0.24
SHOX-204ENST00000554971 SLC22A14Q9Y267 594 aa16.53■□□□□ 0.24
SHOX-204ENST00000554971 IGF2RP11717 2491 aa16.52■□□□□ 0.24
SHOX-204ENST00000554971 ZZEF1O43149 2961 aa16.52■□□□□ 0.24
SHOX-204ENST00000554971 H0YIV9 168 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 BTN3A3O00478 584 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 RPN2P04844 631 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 MAGEA2P43356 314 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 PLIN5Q00G26 463 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 IRF8Q02556 426 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 CHIT1Q13231 466 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 BROXQ5VW32 411 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 CROCCP3Q8IVE0 287 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 ADGRF3Q8IZF5 1079 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 OR8J2Q8NGG1 315 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 RAD51AP1Q96B01 352 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 FAM118AQ9NWS6 357 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 ADAMTS20P59510 1910 aa16.52■□□□□ 0.23
SHOX-204ENST00000554971 D6RAR5 112 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 MYO1DO94832 1006 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 SLC16A8O95907 504 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 CATP04040 527 aaKnown RBP16.51■□□□□ 0.23
SHOX-204ENST00000554971 PROS1P07225 676 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 ERGP11308 486 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 CDK4P11802 303 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 ID4P47928 161 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 RAB28P51157 221 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 RAD23AP54725 363 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 GFERP55789 205 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 SQSTM1Q13501 440 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 KCTD8Q6ZWB6 473 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 AMIGO1Q86WK6 493 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 OFCC1Q8IZS5 231 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 NUDT8Q8WV74 236 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 LZICQ8WZA0 190 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 NCLNQ969V3 563 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 PKP4Q99569 1192 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 POLR1BQ9H9Y6 1135 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 VPS29Q9UBQ0 182 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 RPS6KA6Q9UK32 745 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 ORC6Q9Y5N6 252 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 OR6C74A6NCV1 312 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 OR5K3A6NET4 321 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 CLGNO14967 610 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 SLC16A6O15403 523 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 CLIC3O95833 236 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 PCNAP12004 261 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 GPX2P18283 190 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 PPIBP23284 216 aaKnown RBP16.51■□□□□ 0.23
SHOX-204ENST00000554971 PEBP1P30086 187 aaKnown RBP16.51■□□□□ 0.23
SHOX-204ENST00000554971 PKLRP30613 574 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 ASMTP46597 345 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 TMBIM6P55061 237 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 CDCP2Q5VXM1 449 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 GRHL2Q6ISB3 625 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 ARHGAP22Q7Z5H3 698 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 B3GNT8Q7Z7M8 397 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 OR9A1PQ8NGU1 263 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 OR10G6Q8NH81 332 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 WDR20Q8TBZ3 569 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 APIPQ96GX9 242 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 TSSK3Q96PN8 268 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 TBCDQ9BTW9 1192 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 ABCG4Q9H172 646 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 SRMSQ9H3Y6 488 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 TOR3AQ9H497 397 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 SPHK1Q9NYA1 384 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 GPRC5BQ9NZH0 403 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 PPT2Q9UMR5 302 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 CORO2BQ9UQ03 480 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 SEC16AO15027 2179 aa16.51■□□□□ 0.23
SHOX-204ENST00000554971 MDC1Q14676 2089 aaKnown RBP16.5■□□□□ 0.23
SHOX-204ENST00000554971 DUX1O43812 170 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 DPM1O60762 260 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 SERPINA1P01009 418 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 RYKP34925 604 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 DCTP40126 519 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 NEK2P51955 445 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 ARHGDIAP52565 204 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 PMS2P3Q13401 168 aa16.5■□□□□ 0.23
SHOX-204ENST00000554971 E2F2Q14209 437 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms