RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 OR2G6Q5TZ20 316 aa11.32□□□□□ -0.6
XRCC3-208ENST00000554811 LAX1Q8IWV1 398 aa11.32□□□□□ -0.6
XRCC3-208ENST00000554811 UCN3Q969E3 161 aa11.32□□□□□ -0.6
XRCC3-208ENST00000554811 C7orf34Q96L11 122 aa11.32□□□□□ -0.6
XRCC3-208ENST00000554811 GULP1Q9UBP9 304 aa11.32□□□□□ -0.6
XRCC3-208ENST00000554811 ERVW-1Q9UQF0 538 aa11.32□□□□□ -0.6
XRCC3-208ENST00000554811 WDR87Q6ZQQ6 2873 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 NTN1O95631 604 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 TIMP2P16035 220 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 CRISP1P54107 249 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 SYPL1Q16563 259 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 FXNQ16595 210 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 ARHGAP15Q53QZ3 475 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 CRB2Q5IJ48 1285 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 LHX8Q68G74 356 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 GRHL2Q6ISB3 625 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 SYNPOQ8N3V7 929 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 HORMAD2Q8N7B1 307 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 SLC43A3Q8NBI5 491 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 SLC30A2Q9BRI3 323 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 TP63Q9H3D4 680 aaPredicted RBP11.31□□□□□ -0.6
XRCC3-208ENST00000554811 NEK6Q9HC98 313 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 ZNF226Q9NYT6 803 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 ZNF221Q9UK13 617 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 SSR3Q9UNL2 185 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 FAM25AB3EWG3 89 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 FAM25CB3EWG5 89 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 FAM25GB3EWG6 89 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 CCRL2O00421 344 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 PSIP1O75475 530 aaKnown RBP11.31□□□□□ -0.6
XRCC3-208ENST00000554811 TGFBR2P37173 567 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 MAGEA8P43361 318 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 RAE1P78406 368 aaKnown RBP11.31□□□□□ -0.6
XRCC3-208ENST00000554811 RAB33AQ14088 237 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 ZFP69Q49AA0 526 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 ZNF57Q68EA5 555 aaPredicted RBP11.31□□□□□ -0.6
XRCC3-208ENST00000554811 FAM129CQ86XR2 697 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 CBARPQ8N350 705 aaPredicted RBP11.31□□□□□ -0.6
XRCC3-208ENST00000554811 OR8J2Q8NGG1 315 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 GATAD2BQ8WXI9 593 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 CNDP2Q96KP4 475 aaKnown RBP11.31□□□□□ -0.6
XRCC3-208ENST00000554811 ZSCAN5AQ9BUG6 496 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 TMED9Q9BVK6 235 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 TSSK6Q9BXA6 273 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 CXorf36Q9H7Y0 433 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 MRPS7Q9Y2R9 242 aaKnown RBP11.31□□□□□ -0.6
XRCC3-208ENST00000554811 PEX16Q9Y5Y5 336 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 SOBPA7XYQ1 873 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 HIDE1A8MVS5 230 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 SCN2BO60939 215 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 PEX14O75381 377 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 C1GALT1C1LP0DN25 315 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 ACP5P13686 325 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 TGM1P22735 817 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 CLCNKAP51800 687 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 NCF4Q15080 339 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 CDKN3Q16667 212 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 DEFB115Q30KQ5 88 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 ZC3H12BQ5HYM0 836 aaKnown RBP11.31□□□□□ -0.6
XRCC3-208ENST00000554811 OXR1Q8N573 874 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 ENKURQ8TC29 256 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 TM9SF2Q99805 663 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 CDADC1Q9BWV3 514 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 KCNK6Q9Y257 313 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 MRPS23Q9Y3D9 190 aaKnown RBP11.31□□□□□ -0.6
XRCC3-208ENST00000554811 CLCA3PQ9Y6N3 262 aa11.31□□□□□ -0.6
XRCC3-208ENST00000554811 DICER1Q9UPY3 1922 aaKnown RBP11.3□□□□□ -0.6
XRCC3-208ENST00000554811 METTL15A6NJ78 407 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 CASKO14936 926 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 PDPK1O15530 556 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 KCNK2O95069 426 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 ADH1AP07327 375 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 PCGF2P35227 344 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 MAGEA2P43356 314 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 DGKGP49619 791 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 TIMM50Q3ZCQ8 353 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 PARS2Q7L3T8 475 aaKnown RBP11.3□□□□□ -0.6
XRCC3-208ENST00000554811 PXYLP1Q8TE99 480 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 TFGQ92734 400 aaPredicted RBP11.3□□□□□ -0.6
XRCC3-208ENST00000554811 FERD3LQ96RJ6 166 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 UCK2Q9BZX2 261 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 KLHL1Q9NR64 748 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 SPHK2Q9NRA0 654 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 GIMAP4Q9NUV9 329 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 B3GNT3Q9Y2A9 372 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 CPSF4LA6NMK7 179 aaKnown RBP11.3□□□□□ -0.6
XRCC3-208ENST00000554811 GFYI3L273 518 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 H1F0P07305 194 aaKnown RBP11.3□□□□□ -0.6
XRCC3-208ENST00000554811 MPC1LP0DKB6 136 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 PPP2R1BP30154 601 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 OLR1P78380 273 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 FRMPD2BQ6IN97 320 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 REEP3Q6NUK4 255 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 SLCO4C1Q6ZQN7 724 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 SLC46A3Q7Z3Q1 461 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 CCDC116Q8IYX3 515 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 SLC39A11Q8N1S5 342 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 SYT14Q8NB59 555 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 OR9A1PQ8NGU1 263 aa11.3□□□□□ -0.6
XRCC3-208ENST00000554811 WDR20Q8TBZ3 569 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms