RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 MAP4K5Q9Y4K4 846 aa11.75□□□□□ -0.53
SHMT2-214ENST00000554604 USP9XQ93008 2570 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-214ENST00000554604 HIVEP3Q5T1R4 2406 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 IGLV3-12A0A075B6K2 115 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 KCNE1BA0A087WTH5 132 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 A0A1B0GTL3 188 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 ATP6AP2A0A1C7CYW4 349 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 FEZF1A0PJY2 475 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 BBIP1A8MTZ0 92 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 IDSB3KWA1 339 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 H0Y3Z8 333 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 FFAR3O14843 346 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 GPR42O15529 346 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 TAPBPO15533 448 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 ATP6AP2O75787 350 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 OR4F21O95013 312 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 OTCP00480 354 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 HEXBP07686 556 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 SNRPB2P08579 225 aaKnown RBP11.74□□□□□ -0.53
SHMT2-214ENST00000554604 ALDOCP09972 364 aaKnown RBP11.74□□□□□ -0.53
SHMT2-214ENST00000554604 NPPBP16860 134 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 PIK3CGP48736 1102 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 CCR8P51685 355 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 EMP2P54851 167 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 SOX8P57073 446 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 AP2B1P63010 937 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 SLC34A1Q06495 639 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 SLC6A19Q695T7 634 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 LAPTM4BQ86VI4 370 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 TCAIMQ8N3R3 496 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 ZADH2Q8N4Q0 377 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 TBC1D19Q8N5T2 526 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 RBMXL3Q8N7X1 1067 aaKnown RBP11.74□□□□□ -0.53
SHMT2-214ENST00000554604 CAMKVQ8NCB2 501 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 TSPEARQ8WU66 669 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 PNPLA2Q96AD5 504 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 MIB2Q96AX9 1013 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 RHBDF1Q96CC6 855 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 FBXL8Q96CD0 374 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 TUBGCP3Q96CW5 907 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 CD244Q9BZW8 370 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 ZNF552Q9H707 407 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-214ENST00000554604 WDR41Q9HAD4 459 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 VPS4AQ9UN37 437 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 SH2B3Q9UQQ2 575 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 POMPQ9Y244 141 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 ASB1Q9Y576 335 aa11.74□□□□□ -0.53
SHMT2-214ENST00000554604 K7EPI3 171 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 OR7A17O14581 309 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 FOXS1O43638 330 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 PDE5AO76074 875 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 SORBS2O94875 1100 aaKnown RBP11.73□□□□□ -0.53
SHMT2-214ENST00000554604 SLC35G6P0C7Q6 338 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 LINC00032P0C843 101 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 IDO1P14902 403 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 VARSP26640 1264 aaKnown RBP11.73□□□□□ -0.53
SHMT2-214ENST00000554604 GGT5P36269 586 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 BCL6P41182 706 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 RELNP78509 3460 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 TRAF3Q13114 568 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 SYT16Q17RD7 645 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 FBXO48Q5FWF7 155 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 PIGGQ5H8A4 983 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 MFSD4BQ5TF39 518 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 AGAP7PQ5VUJ5 663 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 REP15Q6BDI9 236 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 FAAH2Q6GMR7 532 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 VN1R4Q7Z5H5 301 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 ASPGQ86U10 573 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 ZGRF1Q86YA3 2104 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 MIER2Q8N344 545 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 AMER3Q8N944 861 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 OR9A4Q8NGU2 314 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 OR56A3Q8NH54 315 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 SLC13A3Q8WWT9 602 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 ESAMQ96AP7 390 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 C8orf44Q96CB5 159 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 THOC3Q96J01 351 aaKnown RBP11.73□□□□□ -0.53
SHMT2-214ENST00000554604 AGAP4Q96P64 663 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 EGFL8Q99944 293 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 MACROD1Q9BQ69 325 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 TMEM79Q9BSE2 394 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 TGIF2Q9GZN2 237 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 LHPPQ9H008 270 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 NOL11Q9H8H0 719 aaKnown RBP11.73□□□□□ -0.53
SHMT2-214ENST00000554604 ZNF160Q9HCG1 818 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 ANKHQ9HCJ1 492 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 SDR39U1Q9NRG7 319 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-214ENST00000554604 AIG1Q9NVV5 245 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 WWOXQ9NZC7 414 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 OPTCQ9UBM4 332 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 BCAP29Q9UHQ4 241 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 MKL2Q9ULH7 1088 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 B3GNT3Q9Y2A9 372 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 TIMM22Q9Y584 194 aa11.73□□□□□ -0.53
SHMT2-214ENST00000554604 NSG1A0A0A6YYJ2 146 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 H0YIG0 161 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 FBP2O00757 339 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 PCDH17O14917 1159 aa11.72□□□□□ -0.53
SHMT2-214ENST00000554604 OR1F1O43749 312 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms