RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 TBRG1Q3YBR2 411 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TEX44Q53QW1 395 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 DCAF12L1Q5VU92 463 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SDHAF4Q5VUM1 108 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 BSPRYQ5W0U4 402 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ADAMTSL4Q6UY14 1074 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 VTCN1Q7Z7D3 282 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TAC4Q86UU9 113 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TMEM25Q86YD3 366 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CPNE8Q86YQ8 564 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PLD3Q8IV08 490 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MCATQ8IVS2 390 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 SFTPA1Q8IWL2 248 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 BBS7Q8IWZ6 715 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CFAP206Q8IYR0 622 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 UBQLNLQ8IYU4 475 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 FUKQ8N0W3 1084 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 DCBLD1Q8N8Z6 715 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MINDY2Q8NBR6 621 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 OR5T1Q8NG75 326 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 OR2I1PQ8NGU4 316 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 UBA3Q8TBC4 463 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TSEN15Q8WW01 171 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 ST6GALNAC6Q969X2 333 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 APOLD1Q96LR9 279 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 HSPA12BQ96MM6 686 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ZNF48Q96MX3 618 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 LRFN5Q96NI6 719 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 BBC3Q96PG8 261 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 CBWD1Q9BRT8 395 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 FUZQ9BT04 418 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PCDHAC1Q9H158 963 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 HIPK2Q9H2X6 1198 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 NELFAQ9H3P2 528 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ZMAT4Q9H898 229 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MED20Q9H944 212 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ACTR8Q9H981 624 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CHMP1AQ9HD42 196 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 RAB9BQ9NP90 201 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MBNL1Q9NR56 388 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 GPR27Q9NS67 375 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 NKIRAS1Q9NYS0 192 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 IMPACTQ9P2X3 320 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ONECUT1Q9UBC0 465 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 LSM7Q9UK45 103 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 ACSL6Q9UKU0 697 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CBLCQ9ULV8 474 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PLLPQ9Y342 182 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 REXO2Q9Y3B8 237 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 PLEKHM1Q9Y4G2 1056 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 RAI2Q9Y5P3 530 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 U3KQV3 271 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MYO18AQ92614 2054 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 PRAMEF27A3QJZ7 478 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 OR2A25A4D2G3 310 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PRAMEF25A6NGN4 478 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 FBLL1A6NHQ2 334 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 LRRC53A6NM62 1247 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ZNF839A8K0R7 811 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 WASH4PA8MWX3 477 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 LINC00587B1AMM8 73 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PRAMEF26H0Y7S4 382 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ZNF208O43345 1280 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 NRP2O60462 931 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PRAMEF4O60810 478 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PRAMEF11O60813 436 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 MFAP3LO75121 409 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 STC2O76061 302 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SNAPINO95295 136 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 VNN1O95497 513 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SNAP29O95721 258 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 KRT6AP02538 564 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 KRT6BP04259 564 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ANXA2P07355 339 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 GP1BAP07359 652 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SRPRAP08240 638 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 CD63P08962 238 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 GSTA2P09210 222 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 NR2C1P13056 603 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 HLA-EP13747 358 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TYRP14679 529 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ZNF26P17031 533 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 JUNBP17275 347 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 VCLP18206 1134 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SPINK2P20155 84 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 OR1E1P30953 314 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 FRKP42685 505 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 MMP13P45452 471 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 PCYT1AP49585 367 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 CARSP49589 748 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 STK19P49842 368 aaPredicted RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 POLE2P56282 527 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 TIRAPP58753 221 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 SRP54P61011 504 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 REEP5Q00765 189 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 E2F1Q01094 437 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 ZNF45Q02386 682 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 FLOT2Q14254 428 aa2.58□□□□□ -2
PRPF39-206ENST00000554429 FASTKD3Q14CZ7 662 aaKnown RBP2.58□□□□□ -2
PRPF39-206ENST00000554429 PTPRRQ15256 657 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms