RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 TPP2P29144 1249 aaPredicted RBP7.02□□□□□ -1.29
LINC00640-201ENST00000554409 TRHRP34981 398 aaPredicted RBP7.02□□□□□ -1.29
LINC00640-201ENST00000554409 BSGP35613 385 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 CD96P40200 585 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 TDGF1P3P51864 188 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 MLF1P58340 268 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 RPS13P62277 151 aaKnown RBP7.02□□□□□ -1.29
LINC00640-201ENST00000554409 HERVK_113P63132 956 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 TNFRSF17Q02223 184 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 STX4Q12846 297 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 BIKQ13323 160 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 ELOAQ14241 798 aaKnown RBP7.02□□□□□ -1.29
LINC00640-201ENST00000554409 OR1C1Q15619 314 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 ZNF766Q5HY98 468 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 FRG2Q64ET8 278 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 MRM1Q6IN84 353 aaKnown RBP7.02□□□□□ -1.29
LINC00640-201ENST00000554409 CLNKQ7Z7G1 428 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 NUDT13Q86X67 352 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 TDRPQ86YL5 185 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 SLC22A9Q8IVM8 553 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 TMEM132CQ8N3T6 1108 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 RNF175Q8N4F7 328 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 KIF2BQ8N4N8 673 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 HORMAD2Q8N7B1 307 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 MORN4Q8NDC4 146 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 OR4F6Q8NGB9 312 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 OR14A16Q8NHC5 309 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 DNAJB8Q8NHS0 232 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 NR4A3Q92570 626 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 DAZLQ92904 295 aaKnown RBP7.02□□□□□ -1.29
LINC00640-201ENST00000554409 NCLNQ969V3 563 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 ATP6V1E2Q96A05 226 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 ANKRD9Q96BM1 317 aaPredicted RBP7.02□□□□□ -1.29
LINC00640-201ENST00000554409 SIGLEC12Q96PQ1 595 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 FRG2BQ96QU4 278 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 TAAR6Q96RI8 345 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 SERPINI1Q99574 410 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 ERVK-6Q9BXR3 956 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 ALOXE3Q9BYJ1 711 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 DEFB126Q9BYW3 111 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 CDCP1Q9H5V8 836 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 PNO1Q9NRX1 252 aaKnown RBP7.02□□□□□ -1.29
LINC00640-201ENST00000554409 OLAHQ9NV23 265 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 LYARQ9NX58 379 aaKnown RBP7.02□□□□□ -1.29
LINC00640-201ENST00000554409 TMEM216Q9P0N5 145 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 TRPS1Q9UHF7 1281 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 ZNF223Q9UK11 482 aaPredicted RBP7.02□□□□□ -1.29
LINC00640-201ENST00000554409 NBASA2RRP1 2371 aa7.02□□□□□ -1.29
LINC00640-201ENST00000554409 ESPL1Q14674 2120 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 TRBV11-1A0A0K0K1C0 115 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 A0A1B0GTL3 188 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 ASPDHA6ND91 283 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 SAP18O00422 153 aaKnown RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 PROM1O43490 865 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 FGF17O60258 216 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 ZNF500O60304 480 aaPredicted RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 DLX3O60479 287 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 LDB3O75112 727 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 GLRA3O75311 464 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 SEMA7AO75326 666 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 SH3BGRLO75368 114 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 EEDO75530 441 aaKnown RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 NEURL1O76050 574 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 AGFG2O95081 481 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 DDAH2O95865 285 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 SHBGP04278 402 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 IFNA16P05015 189 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 ATP5F1P24539 256 aaPredicted RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 PPP2R1BP30154 601 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 TLX1P31314 330 aaPredicted RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 BUD31P41223 144 aaPredicted RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 STT3AP46977 705 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 CYB561P49447 251 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 HLCSP50747 726 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 NEK2P51955 445 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 HNRNPH2P55795 449 aaKnown RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 CLCQ05315 142 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 SLAMF1Q13291 335 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 EIF2S3LQ2VIR3 472 aaKnown RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 ZNF678Q5SXM1 525 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 SH2D5Q6ZV89 423 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 RPS27LQ71UM5 84 aaKnown RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 MILR1Q7Z6M3 343 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 GPR180Q86V85 440 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 CCDC116Q8IYX3 515 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 TMEM178AQ8NBL3 297 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 OR8K3Q8NH51 312 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 SSC4DQ8WTU2 575 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 PTPMT1Q8WUK0 201 aaPredicted RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 UBLCP1Q8WVY7 318 aaPredicted RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 TANKQ92844 425 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 L3HYPDHQ96EM0 354 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 PSMG3-AS1Q96PY0 264 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 PELOQ9BRX2 385 aaKnown RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 SORBS1Q9BX66 1292 aaKnown RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 RPF2Q9H7B2 306 aaKnown RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 ANKZF1Q9H8Y5 726 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 BRF2Q9HAW0 419 aa7.01□□□□□ -1.29
LINC00640-201ENST00000554409 SEMA4BQ9NPR2 832 aaPredicted RBP7.01□□□□□ -1.29
LINC00640-201ENST00000554409 LRFN1Q9P244 771 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms