RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 GIMAP2Q9UG22 337 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 GTF3C4Q9UKN8 822 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 NAALAD2Q9Y3Q0 740 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 RGPD8O14715 1765 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-210ENST00000553693 COL14A1Q05707 1796 aaKnown RBP2.96□□□□□ -1.94
SCFD1-210ENST00000553693 CASZ1Q86V15 1759 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 KIAA0232Q92628 1395 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 ABCC11Q96J66 1382 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 FMN2Q9NZ56 1722 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 NRXN1Q9ULB1 1477 aa2.96□□□□□ -1.94
SCFD1-210ENST00000553693 RPGRIP1LQ68CZ1 1315 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 KIF1AQ12756 1690 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 RRBP1Q9P2E9 1410 aaKnown RBP2.95□□□□□ -1.94
SCFD1-210ENST00000553693 K7EQG2 157 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 HAT1O14929 419 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 RECQL5O94762 991 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-210ENST00000553693 ERCC2P18074 760 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 HSPA4P34932 840 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 CAMK2DQ13557 499 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 SLC15A2Q16348 729 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 KYNUQ16719 465 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 FAM174BQ3ZCQ3 159 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 LEMD1Q68G75 181 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 RPUSD3Q6P087 351 aaKnown RBP2.95□□□□□ -1.94
SCFD1-210ENST00000553693 EMBQ6PCB8 327 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 PLPPR4Q7Z2D5 763 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 METTL23Q86XA0 190 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 KRTAP11-1Q8IUC1 163 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 LRRC49Q8IUZ0 686 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 TEX26Q8N6G2 289 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 MSANTD4Q8NCY6 345 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 MRAPQ8TCY5 172 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 AFAP1L1Q8TED9 768 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 MRPS27Q92552 414 aaKnown RBP2.95□□□□□ -1.94
SCFD1-210ENST00000553693 EXT2Q93063 718 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 B3GALT6Q96L58 329 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 RMDN2Q96LZ7 410 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 JAKMIP1Q96N16 626 aaKnown RBP2.95□□□□□ -1.94
SCFD1-210ENST00000553693 ZNF558Q96NG5 402 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 CITED2Q99967 270 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-210ENST00000553693 SP140LQ9H930 580 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 KCNK13Q9HB14 408 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 IARS2Q9NSE4 1012 aaKnown RBP2.95□□□□□ -1.94
SCFD1-210ENST00000553693 AGTPBP1Q9UPW5 1226 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 SHANK3Q9BYB0 1731 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 ROCK1Q13464 1354 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 CHD4Q14839 1912 aa2.95□□□□□ -1.94
SCFD1-210ENST00000553693 DLC1Q96QB1 1528 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 A0A1W2PPW3 197 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 SIGLEC5O15389 551 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 DIAPH2O60879 1101 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 BAG2O95816 211 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 FYNP06241 537 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 ADRB2P07550 413 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 CPT2P23786 658 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 OAS2P29728 719 aaKnown RBP2.94□□□□□ -1.94
SCFD1-210ENST00000553693 ATP5DP30049 168 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 DRD3P35462 400 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 RAD23AP54725 363 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 IL10RBQ08334 325 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 TFCP2Q12800 502 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 ZNF506Q5JVG8 444 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 C1QTNF12Q5T7M4 302 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 DHRS11Q6UWP2 260 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 MCM10Q7L590 875 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 DNAJB7Q7Z6W7 309 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-210ENST00000553693 PIGWQ7Z7B1 504 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 RPAINQ86UA6 219 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 SNX32Q86XE0 403 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 OR8H3Q8N146 312 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 NKAIN3Q8N8D7 197 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 PI4KAP1Q8N8J0 262 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 ZIM3Q96PE6 472 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 PRAM1Q96QH2 718 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 PCDHB18PQ96TA0 734 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 FERMT1Q9BQL6 677 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 RPF1Q9H9Y2 349 aaKnown RBP2.94□□□□□ -1.94
SCFD1-210ENST00000553693 MAP3K5Q99683 1374 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 ALS2Q96Q42 1657 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 FER1L5A0AVI2 2057 aa2.94□□□□□ -1.94
SCFD1-210ENST00000553693 GOLGB1Q14789 3259 aaKnown RBP2.94□□□□□ -1.94
SCFD1-210ENST00000553693 SSH2Q76I76 1423 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 YTHDC2Q9H6S0 1430 aaKnown RBP2.93□□□□□ -1.94
SCFD1-210ENST00000553693 ATP10DQ9P241 1426 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 TRPM3Q9HCF6 1732 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-210ENST00000553693 GPRASP1Q5JY77 1395 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 RPL37AP8A6NKH3 93 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 H3BMM5 538 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 UBE2CO00762 179 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 LY6G6DO95868 133 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 CD1DP15813 335 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 GOT1P17174 413 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 MUTP22033 750 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 PSMA3P25788 255 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 CTNNA2P26232 953 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 DUTP33316 252 aaKnown RBP2.93□□□□□ -1.94
SCFD1-210ENST00000553693 FEN1P39748 380 aaKnown RBP2.93□□□□□ -1.94
SCFD1-210ENST00000553693 MATKP42679 507 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 SLC1A4P43007 532 aa2.93□□□□□ -1.94
SCFD1-210ENST00000553693 OR3A3P47888 321 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms