RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 LRATO95237 230 aa8.79□□□□□ -1
CHD8-205ENST00000553651 ETHE1O95571 254 aa8.79□□□□□ -1
CHD8-205ENST00000553651 TBX6O95947 436 aaPredicted RBP8.79□□□□□ -1
CHD8-205ENST00000553651 IFNA2P01563 188 aa8.79□□□□□ -1
CHD8-205ENST00000553651 IFNB1P01574 187 aa8.79□□□□□ -1
CHD8-205ENST00000553651 HPNP05981 417 aa8.79□□□□□ -1
CHD8-205ENST00000553651 TMIGD3P0DMS9 266 aaPredicted RBP8.79□□□□□ -1
CHD8-205ENST00000553651 HNRNPH1P31943 449 aaKnown RBP8.79□□□□□ -1
CHD8-205ENST00000553651 RPL22P35268 128 aaKnown RBP8.79□□□□□ -1
CHD8-205ENST00000553651 KCNJ2P63252 427 aa8.79□□□□□ -1
CHD8-205ENST00000553651 TPM4P67936 248 aa8.79□□□□□ -1
CHD8-205ENST00000553651 BTN3A2P78410 334 aa8.79□□□□□ -1
CHD8-205ENST00000553651 DHX9Q08211 1270 aaKnown RBP8.79□□□□□ -1
CHD8-205ENST00000553651 ASPHQ12797 758 aa8.79□□□□□ -1
CHD8-205ENST00000553651 SLC13A2Q13183 592 aa8.79□□□□□ -1
CHD8-205ENST00000553651 TBX2Q13207 712 aaPredicted RBP8.79□□□□□ -1
CHD8-205ENST00000553651 NHSL2Q5HYW2 709 aa8.79□□□□□ -1
CHD8-205ENST00000553651 TOR1AIP1Q5JTV8 583 aa8.79□□□□□ -1
CHD8-205ENST00000553651 UGT3A1Q6NUS8 523 aa8.79□□□□□ -1
CHD8-205ENST00000553651 C20orf204Q6ZNR8 217 aa8.79□□□□□ -1
CHD8-205ENST00000553651 SYDE1Q6ZW31 735 aaPredicted RBP8.79□□□□□ -1
CHD8-205ENST00000553651 ADGRE4PQ86SQ3 457 aa8.79□□□□□ -1
CHD8-205ENST00000553651 LUZP2Q86TE4 346 aa8.79□□□□□ -1
CHD8-205ENST00000553651 DENND6AQ8IWF6 608 aa8.79□□□□□ -1
CHD8-205ENST00000553651 C9orf40Q8IXQ3 194 aa8.79□□□□□ -1
CHD8-205ENST00000553651 PM20D2Q8IYS1 436 aa8.79□□□□□ -1
CHD8-205ENST00000553651 LIX1Q8N485 282 aa8.79□□□□□ -1
CHD8-205ENST00000553651 FAM47BQ8NA70 645 aa8.79□□□□□ -1
CHD8-205ENST00000553651 TRPV3Q8NET8 790 aa8.79□□□□□ -1
CHD8-205ENST00000553651 OR14A16Q8NHC5 309 aa8.79□□□□□ -1
CHD8-205ENST00000553651 SLC2A12Q8TD20 617 aa8.79□□□□□ -1
CHD8-205ENST00000553651 EEF1AKMT1Q8WVE0 214 aa8.79□□□□□ -1
CHD8-205ENST00000553651 SLC44A1Q8WWI5 657 aa8.79□□□□□ -1
CHD8-205ENST00000553651 DAZLQ92904 295 aaKnown RBP8.79□□□□□ -1
CHD8-205ENST00000553651 SPACA9Q96E40 222 aaPredicted RBP8.79□□□□□ -1
CHD8-205ENST00000553651 WFIKKN1Q96NZ8 548 aa8.79□□□□□ -1
CHD8-205ENST00000553651 TRIB1Q96RU8 372 aa8.79□□□□□ -1
CHD8-205ENST00000553651 NPLQ9BXD5 320 aaPredicted RBP8.79□□□□□ -1
CHD8-205ENST00000553651 UGT2B28Q9BY64 529 aa8.79□□□□□ -1
CHD8-205ENST00000553651 OR8D2Q9GZM6 311 aa8.79□□□□□ -1
CHD8-205ENST00000553651 FBXO6Q9NRD1 293 aaPredicted RBP8.79□□□□□ -1
CHD8-205ENST00000553651 SLC6A5Q9Y345 797 aa8.79□□□□□ -1
CHD8-205ENST00000553651 IKBKGQ9Y6K9 419 aa8.79□□□□□ -1
CHD8-205ENST00000553651 CLCA3PQ9Y6N3 262 aa8.79□□□□□ -1
CHD8-205ENST00000553651 URADA6NGE7 173 aa8.78□□□□□ -1
CHD8-205ENST00000553651 A8MXE2 369 aa8.78□□□□□ -1
CHD8-205ENST00000553651 CASKO14936 926 aa8.78□□□□□ -1
CHD8-205ENST00000553651 PFDN6O15212 129 aa8.78□□□□□ -1
CHD8-205ENST00000553651 CTNSO60931 367 aa8.78□□□□□ -1
CHD8-205ENST00000553651 ACSL3O95573 720 aa8.78□□□□□ -1
CHD8-205ENST00000553651 IGKV3-11P04433 115 aa8.78□□□□□ -1
CHD8-205ENST00000553651 C8GP07360 202 aa8.78□□□□□ -1
CHD8-205ENST00000553651 FBXO45P0C2W1 286 aa8.78□□□□□ -1
CHD8-205ENST00000553651 CRYGSP22914 178 aa8.78□□□□□ -1
CHD8-205ENST00000553651 CCKARP32238 428 aa8.78□□□□□ -1
CHD8-205ENST00000553651 MC3RP41968 323 aa8.78□□□□□ -1
CHD8-205ENST00000553651 PCYT1AP49585 367 aa8.78□□□□□ -1
CHD8-205ENST00000553651 CDK9P50750 372 aaKnown RBP8.78□□□□□ -1
CHD8-205ENST00000553651 NR1H2P55055 460 aa8.78□□□□□ -1
CHD8-205ENST00000553651 SP140Q13342 867 aa8.78□□□□□ -1
CHD8-205ENST00000553651 DUPD1Q68J44 220 aa8.78□□□□□ -1
CHD8-205ENST00000553651 ZNF470Q6ECI4 717 aa8.78□□□□□ -1
CHD8-205ENST00000553651 PLXDC2Q6UX71 529 aa8.78□□□□□ -1
CHD8-205ENST00000553651 C22orf34Q6ZV56 151 aa8.78□□□□□ -1
CHD8-205ENST00000553651 MEIOBQ8N635 442 aa8.78□□□□□ -1
CHD8-205ENST00000553651 OR10G3Q8NGC4 313 aa8.78□□□□□ -1
CHD8-205ENST00000553651 OR5L2Q8NGL0 311 aa8.78□□□□□ -1
CHD8-205ENST00000553651 NUBPLQ8TB37 319 aa8.78□□□□□ -1
CHD8-205ENST00000553651 SLC5A11Q8WWX8 675 aa8.78□□□□□ -1
CHD8-205ENST00000553651 GAL3ST3Q96A11 431 aa8.78□□□□□ -1
CHD8-205ENST00000553651 MS4A6EQ96DS6 147 aa8.78□□□□□ -1
CHD8-205ENST00000553651 PIK3IP1Q96FE7 263 aa8.78□□□□□ -1
CHD8-205ENST00000553651 G6PC3Q9BUM1 346 aa8.78□□□□□ -1
CHD8-205ENST00000553651 SFXN3Q9BWM7 321 aa8.78□□□□□ -1
CHD8-205ENST00000553651 ALOXE3Q9BYJ1 711 aa8.78□□□□□ -1
CHD8-205ENST00000553651 BFARQ9NZS9 450 aa8.78□□□□□ -1
CHD8-205ENST00000553651 CNIH4Q9P003 139 aa8.78□□□□□ -1
CHD8-205ENST00000553651 AMFRQ9UKV5 643 aa8.78□□□□□ -1
CHD8-205ENST00000553651 PACSIN2Q9UNF0 486 aaPredicted RBP8.78□□□□□ -1
CHD8-205ENST00000553651 CAMK2AQ9UQM7 478 aa8.78□□□□□ -1
CHD8-205ENST00000553651 PRR14LQ5THK1 2151 aa8.78□□□□□ -1
CHD8-205ENST00000553651 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 TCRBV7S3A2A0A539 114 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 ANKRD33BA6NCL7 494 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 BTNL10A8MVZ5 291 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 C17orf105B2RV13 164 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 RNF223E7ERA6 249 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 ERN1O75460 977 aaKnown RBP8.77□□□□□ -1.01
CHD8-205ENST00000553651 TNFSF13O75888 250 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 RCBTB2O95199 551 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 IFNA16P05015 189 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 GDF1P27539 372 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 LIM2P55344 173 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 FAM27E3Q08E93 113 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 TBL3Q12788 808 aaKnown RBP8.77□□□□□ -1.01
CHD8-205ENST00000553651 CSHL1Q14406 222 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 ADPRMQ3LIE5 342 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 CAVIN1Q6NZI2 390 aaKnown RBP8.77□□□□□ -1.01
CHD8-205ENST00000553651 NXPE4Q6UWF7 544 aa8.77□□□□□ -1.01
CHD8-205ENST00000553651 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms