RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 TLDC1Q6P9B6 456 aa12.99□□□□□ -0.33
APEX1-205ENST00000553555 ARPINQ7Z6K5 226 aa12.99□□□□□ -0.33
APEX1-205ENST00000553555 HPS6Q86YV9 775 aa12.99□□□□□ -0.33
APEX1-205ENST00000553555 GOT1L1Q8NHS2 421 aaPredicted RBP12.99□□□□□ -0.33
APEX1-205ENST00000553555 EXOSC8Q96B26 276 aaKnown RBP12.99□□□□□ -0.33
APEX1-205ENST00000553555 GBP5Q96PP8 586 aa12.99□□□□□ -0.33
APEX1-205ENST00000553555 PHF12Q96QT6 1004 aa12.99□□□□□ -0.33
APEX1-205ENST00000553555 FANCEQ9HB96 536 aa12.99□□□□□ -0.33
APEX1-205ENST00000553555 SLC35C2Q9NQQ7 365 aa12.99□□□□□ -0.33
APEX1-205ENST00000553555 PRDM9Q9NQV7 894 aa12.99□□□□□ -0.33
APEX1-205ENST00000553555 CUTCQ9NTM9 273 aa12.99□□□□□ -0.33
APEX1-205ENST00000553555 UTS2RQ9UKP6 389 aa12.99□□□□□ -0.33
APEX1-205ENST00000553555 NME4O00746 187 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 PDPK1O15530 556 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 CHST10O43529 356 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 RDH16O75452 317 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 SORBS2O94875 1100 aaKnown RBP12.98□□□□□ -0.33
APEX1-205ENST00000553555 C6orf47O95873 294 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 ZCCHC18P0CG32 403 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 NR2F6P10588 404 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 TLX1P31314 330 aaPredicted RBP12.98□□□□□ -0.33
APEX1-205ENST00000553555 RAB38P57729 211 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 RABL3Q5HYI8 236 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 SAMD4BQ5PRF9 694 aaKnown RBP12.98□□□□□ -0.33
APEX1-205ENST00000553555 PHF19Q5T6S3 580 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 FAM180BQ6P0A1 224 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 DNAJC14Q6Y2X3 702 aaPredicted RBP12.98□□□□□ -0.33
APEX1-205ENST00000553555 ZNF621Q6ZSS3 439 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 GPR135Q8IZ08 494 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 DTWD1Q8N5C7 304 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 RNF148Q8N7C7 305 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 OR8J3Q8NGG0 315 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 OR4A15Q8NGL6 344 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 CSF3RQ99062 836 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 CDC6Q99741 560 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 TRIM8Q9BZR9 551 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 CLK4Q9HAZ1 481 aaKnown RBP12.98□□□□□ -0.33
APEX1-205ENST00000553555 SLAMF7Q9NQ25 335 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.98□□□□□ -0.33
APEX1-205ENST00000553555 PSME2Q9UL46 239 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 PCDHGB4Q9UN71 923 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 L3MBTL1Q9Y468 752 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 SPACA6W5XKT8 324 aa12.98□□□□□ -0.33
APEX1-205ENST00000553555 PRORSD1PA6NEY8 169 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 H0YIG0 161 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 CYR61O00622 381 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 ZNF749O43361 778 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 GDF9O60383 454 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 ERAL1O75616 437 aaKnown RBP12.97□□□□□ -0.33
APEX1-205ENST00000553555 ME2P23368 584 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 AVPR1BP47901 424 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 MANFP55145 182 aaKnown RBP12.97□□□□□ -0.33
APEX1-205ENST00000553555 HBA1P69905 142 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 ELF3P78545 371 aaPredicted RBP12.97□□□□□ -0.33
APEX1-205ENST00000553555 SELPLGQ14242 412 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 SPATS1Q496A3 300 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 YOD1Q5VVQ6 348 aaPredicted RBP12.97□□□□□ -0.33
APEX1-205ENST00000553555 FBXW10Q5XX13 1052 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 TTLL10Q6ZVT0 673 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 SHISA5Q8N114 240 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 OR5P2Q8WZ92 322 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 MMABQ96EY8 250 aaPredicted RBP12.97□□□□□ -0.33
APEX1-205ENST00000553555 RPF2Q9H7B2 306 aaKnown RBP12.97□□□□□ -0.33
APEX1-205ENST00000553555 ACSS1Q9NUB1 689 aaPredicted RBP12.97□□□□□ -0.33
APEX1-205ENST00000553555 SIDT1Q9NXL6 827 aaKnown RBP12.97□□□□□ -0.33
APEX1-205ENST00000553555 TAS2R9Q9NYW1 312 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 CCDC88CQ9P219 2028 aa12.97□□□□□ -0.33
APEX1-205ENST00000553555 MYO1GB0I1T2 1018 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 FOXD2O60548 495 aaPredicted RBP12.96□□□□□ -0.33
APEX1-205ENST00000553555 CIB2O75838 187 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 ARSFP54793 590 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 EEFSECP57772 596 aaKnown RBP12.96□□□□□ -0.33
APEX1-205ENST00000553555 MTPNP58546 118 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 MLC1Q15049 377 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 CEBPEQ15744 281 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 PRAMEF17Q5VTA0 474 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 OR52E8Q6IFG1 317 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 NET1Q7Z628 596 aaPredicted RBP12.96□□□□□ -0.33
APEX1-205ENST00000553555 B3GNT8Q7Z7M8 397 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 MVB12AQ96EY5 273 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 CNRIP1Q96F85 164 aaPredicted RBP12.96□□□□□ -0.33
APEX1-205ENST00000553555 ZBED6CLQ96FA7 236 aaPredicted RBP12.96□□□□□ -0.33
APEX1-205ENST00000553555 ZNF681Q96N22 645 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 OR6C1Q96RD1 312 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 SH3GL1Q99961 368 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 CPPED1Q9BRF8 314 aaPredicted RBP12.96□□□□□ -0.33
APEX1-205ENST00000553555 NDC1Q9BTX1 674 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 TRIM4Q9C037 500 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 IKZF5Q9H5V7 419 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 ZNF282Q9UDV7 671 aaPredicted RBP12.96□□□□□ -0.33
APEX1-205ENST00000553555 VPS4AQ9UN37 437 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 POMPQ9Y244 141 aa12.96□□□□□ -0.33
APEX1-205ENST00000553555 TMEM184BQ9Y519 407 aaPredicted RBP12.96□□□□□ -0.33
APEX1-205ENST00000553555 A8MUI8 341 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 FAM227AF5H4B4 570 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 DSCR3O14972 297 aa12.95□□□□□ -0.34
APEX1-205ENST00000553555 NVLO15381 856 aaKnown RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 ABCB1P08183 1280 aaPredicted RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 RNH1P13489 461 aaKnown RBP12.95□□□□□ -0.34
APEX1-205ENST00000553555 HSD17B1P14061 328 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms