RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 H6PDO95479 791 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 C6orf47O95873 294 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 VIPP01282 170 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 SEMG1P04279 462 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 ALPLP05186 524 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 FABP3P05413 133 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 IFI6P09912 130 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 SLC35G6P0C7Q6 338 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 UBTFL6P0CB48 400 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 CDH2P19022 906 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 HIST1H1TP22492 207 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 NTSP30990 170 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 CHI3L1P36222 383 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 CAPGP40121 348 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 SSR2P43308 183 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 RPL5P46777 297 aaKnown RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 STARD6P59095 220 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 MEF2AQ02078 507 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 HYAL2Q12891 473 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF385BQ569K4 471 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 CRB2Q5IJ48 1285 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 C6orf52Q5T4I8 152 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 OR52E8Q6IFG1 317 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 MRM1Q6IN84 353 aaKnown RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 NIPAL1Q6NVV3 410 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 ABHD17CQ6PCB6 329 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 KLHL35Q6PF15 583 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 SHQ1Q6PI26 577 aaKnown RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 SHISA2Q6UWI4 295 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF438Q7Z4V0 828 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 PARGQ86W56 976 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 PTOV1Q86YD1 416 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 EPHX4Q8IUS5 362 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 TRIM48Q8IWZ4 208 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 ADGRF3Q8IZF5 1079 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 C2orf73Q8N5S3 287 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 CAMKK1Q8N5S9 505 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 CAMKVQ8NCB2 501 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 PJA1Q8NG27 643 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 PNPT1Q8TCS8 783 aaKnown RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 SFXN5Q8TD22 340 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 TMBIM1Q969X1 311 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 GAL3ST3Q96A11 431 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 MS4A6EQ96DS6 147 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 ERLEC1Q96DZ1 483 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 NEURL3Q96EH8 262 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 TOE1Q96GM8 510 aaKnown RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 VPS50Q96JG6 964 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 CNBD2Q96M20 576 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 DOHHQ9BU89 302 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 ABCG4Q9H172 646 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 EPS8L2Q9H6S3 715 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 UCK1Q9HA47 277 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 CLK4Q9HAZ1 481 aaKnown RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 SLC6A20Q9NP91 592 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 A4GALTQ9NPC4 353 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 LHX9Q9NQ69 397 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 C1GALT1Q9NS00 363 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 SEMA3GQ9NS98 782 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 GIMAP4Q9NUV9 329 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 TAAR2Q9P1P5 351 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF624Q9P2J8 865 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-221ENST00000553498 THEGQ9P2T0 379 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 PHF11Q9UIL8 331 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 USP22Q9UPT9 525 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 ANGPT4Q9Y264 503 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 MYRFQ9Y2G1 1151 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 PADI2Q9Y2J8 665 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 PLEKHM1Q9Y4G2 1056 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 DENND4AQ7Z401 1863 aa6.94□□□□□ -1.3
ATXN3-221ENST00000553498 PLXNB3Q9ULL4 1909 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 TCF20Q9UGU0 1960 aaKnown RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 DOCK6Q96HP0 2047 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 FEZF1A0PJY2 475 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 OR2A25A4D2G3 310 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 FAM149AA5PLN7 773 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 SAP18O00422 153 aaKnown RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 EI24O14681 340 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 TM4SF5O14894 197 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ADAMDEC1O15204 470 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 NARSO43776 548 aaKnown RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 LCMT2O60294 686 aaKnown RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 E2F6O75461 281 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ZNF682O95780 498 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 CLPTM1O96005 669 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ASGR2P07307 311 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 PABPC4LP0CB38 370 aaKnown RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 THRBP10828 461 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 FPR1P21462 350 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 ATP5A1P25705 553 aaKnown RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 CD27P26842 260 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 PSMB5P28074 263 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 PEBP1P30086 187 aaKnown RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 DNAJA1P31689 397 aaKnown RBP6.93□□□□□ -1.3
ATXN3-221ENST00000553498 MPIP34949 423 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 BCL6P41182 706 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 CRATP43155 626 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 MVDP53602 400 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 NR1H2P55055 460 aa6.93□□□□□ -1.3
ATXN3-221ENST00000553498 MANFP55145 182 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms